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ci(inference): round the counts using stochastic rounding #50

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merged 2 commits into from May 19, 2022

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CaibinSh
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round the resulting counts (float) for easy interpretation and better integration into other methods, such as totalVI and scVI.

Credits should go to @mdmanurung

@CaibinSh CaibinSh linked an issue May 19, 2022 that may be closed by this pull request
@CaibinSh CaibinSh merged commit bf6e226 into develop May 19, 2022
@CaibinSh CaibinSh deleted the 47-stochastic-rounding branch May 19, 2022 18:48
CaibinSh added a commit that referenced this pull request May 19, 2022
* Chore(main): refactor device

* Chore(test): modify unittest

* Chore: add scAR logo in documentation

* Chore: introduce ci=None to speed up kneeplot

* chore: refactor setup files

* ci(inference): round the counts using stochastic rounding (#50)

* Add option for stochastic rounding to integer (#48)

* ci(inference): add round_to_int parameters in several places

Co-authored-by: mdmanurung <10704760+mdmanurung@users.noreply.github.com>

* make a new release

Co-authored-by: mdmanurung <10704760+mdmanurung@users.noreply.github.com>
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Stochastic rounding to integers for downstream use in TotalVI/SCVI
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