Cleaning autotools files and old unused tools.

.gitignore

@@ -46,3 +46,108 @@ scripts/*.pyc
 *.deps*
 *.dirstamp*
 *.libs*
+
+# Prerequisites
+*.d
+
+# Compiled Object files
+*.slo
+*.lo
+*.o
+*.obj
+
+# Precompiled Headers
+*.gch
+*.pch
+
+# Compiled Dynamic libraries
+*.so
+*.dylib
+*.dll
+
+# Fortran module files
+*.mod
+*.smod
+
+# Compiled Static libraries
+*.lai
+*.la
+*.a
+*.lib
+
+# Executables
+*.exe
+*.out
+*.app
+Footer
+
+# http://www.gnu.org/software/automake
+
+Makefile.in
+/ar-lib
+/mdate-sh
+/py-compile
+/test-driver
+/ylwrap
+.deps/
+.dirstamp
+
+# http://www.gnu.org/software/autoconf
+
+autom4te.cache
+/autoscan.log
+/autoscan-*.log
+/aclocal.m4
+/compile
+/config.cache
+/config.guess
+/config.h.in
+/config.log
+/config.status
+/config.sub
+/configure
+/configure.scan
+/depcomp
+/install-sh
+/missing
+/stamp-h1
+
+# https://www.gnu.org/software/libtool/
+
+/ltmain.sh
+
+# http://www.gnu.org/software/texinfo
+
+/texinfo.tex
+
+# http://www.gnu.org/software/m4/
+
+m4/libtool.m4
+m4/ltoptions.m4
+m4/ltsugar.m4
+m4/ltversion.m4
+m4/lt~obsolete.m4
+
+# Generated Makefile
+# (meta build system like autotools,
+# can automatically generate from config.status script
+# (which is called by configure script))
+Makefile
+
+# Docs
+*.pdf
+
+# Datafile
+*.fits 
+
+# Eclipse
+.autotools
+.cproject
+.idea
+.project
+.settings
+
+# Compilation directories
+Optimized/
+BDocs/
+Coverage/