Ontologies that don't resolve

[simonjupp]

These ontologies don't resolve from the yaml file

http://www.berkeleybop.org/ontologies/dpo.owl
http://www.berkeleybop.org/ontologies/kisao.owl
http://www.berkeleybop.org/ontologies/lipro.owl
http://www.berkeleybop.org/ontologies/nmr.owl
http://www.berkeleybop.org/ontologies/ovao.owl
http://www.berkeleybop.org/ontologies/resid.owl
http://www.berkeleybop.org/ontologies/rnao.owl
http://www.berkeleybop.org/ontologies/xso.owl

[cmungall]

@dosumis do you recall why we made the purl for dpo be http://purl.obolibrary.org/obo/fbcv/dpo.owl

We could make this a subset of the main http://obofoundry.github.io/ontology/fbcv.html - but we decided to mark this as obsolete at some point

It's probably too much churn to change this now, I suggest we have http://obofoundry.github.io/ontology/dpo.html as its own top level and live with the fact the ontology and class purls aren't derived in exactly the same way

[dosumis]

@dosumis do you recall why we made the purl for dpo be http://purl.obolibrary.org/obo/fbcv/dpo.owl

Probably because we never got around to making a foundry request for dpo. Puting it under fbcv made sense as dpo is a subontology of fbcv and we didn't want the churn at FlyBase caused by splitting it out. I guess there's no reason not to put in a foundry request http://purl.obolibrary.org/obo/dpo.owl . We could keep the old PURL too. CC @mmc46

[cmungall]

Note to site developers: you can now do the following:

make valid-purl-report.txt

to validate all product purls (ie the canonical product for an ontology project, as well as each individual registered product)

[cmungall]

http://www.berkeleybop.org/ontologies/dpo.owl
registered product is http://purl.obolibrary.org/obo/fbcv/dpo.owl
resolves
http://www.berkeleybop.org/ontologies/kisao.owl
http://purl.obolibrary.org/obo/kisao.owl resolves
(but note the ontologyID is not a purl. Consider deregister?
http://www.berkeleybop.org/ontologies/lipro.owl
product deregistered

http://www.berkeleybop.org/ontologies/nmr.owl
obsolete
http://www.berkeleybop.org/ontologies/ovao.owl
typo. Entry removed

http://www.berkeleybop.org/ontologies/resid.owl
obsolete
http://www.berkeleybop.org/ontologies/rnao.owl
works
http://www.berkeleybop.org/ontologies/xso.owl
typo. Removed.

[dosumis]

Why the berkeleybop URL for dpo?

On Tue, Sep 22, 2015 at 1:49 AM, Chris Mungall notifications@github.com
wrote:

http://www.berkeleybop.org/ontologies/dpo.owl
registered product is http://purl.obolibrary.org/obo/fbcv/dpo.owl
resolves
http://www.berkeleybop.org/ontologies/kisao.owl
http://purl.obolibrary.org/obo/kisao.owl resolves
(but note the ontologyID is not a purl. Consider deregister?
http://www.berkeleybop.org/ontologies/lipro.owl
product deregistered

http://www.berkeleybop.org/ontologies/nmr.owl
obsolete
http://www.berkeleybop.org/ontologies/ovao.owl
typo. Entry removed

http://www.berkeleybop.org/ontologies/resid.owl
obsolete
http://www.berkeleybop.org/ontologies/rnao.owl
works
http://www.berkeleybop.org/ontologies/xso.owl
typo. Removed.

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