Whole-side image created with Orthanc dicom-izer does not display

[Malik-Adil]

I have converted the .tiff (microscopy image) image to Dicom using Orthanc dicom-izer plugin. Converted image work in the Orthanc Viewer. but when I open the image in Ohif viewer it gives me error as shown in the Attachment.

[swederik]

It looks like it is retrieving part of the metadata tree but breaking on one of the instances. I would have to see the image to understand what is wrong. This is really an issue for https://github.com/dcmjs-org/dicom-microscopy-viewer, but if you provide the file we can try to understand what is wrong.

[Malik-Adil]

Hi Swederik,
Thanks, This is Orthanc Converted Dicom file.

https://drive.google.com/drive/folders/1zBwSAZxuXfkn5j-GxP_iiycYKNrtkeWA?usp=sharing

[Malik-Adil]

Hi, swederik,

Above issue is solve I have to use the dataset.json for adding the missing Tags. Know I m facing the issue as shown in the Attachment.

Thanks

[swederik]

Can you expand the error to show the whole issue? You are showing the minimized version.

[Malik-Adil]

Expanded Error Image

[Malik-Adil]

I have added the new screen short plz check. Thanks

…

On Wed, Jun 26, 2019 at 5:31 PM Erik Ziegler ***@***.***> wrote: Can you expand the error to show the whole issue? You are showing the minimized version. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#589?email_source=notifications&email_token=AE3X44S5254B7JIRLNTL67DP4NORBA5CNFSM4H3EJMR2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGODYTLR7I#issuecomment-505854205>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AE3X44QJKWVUG3AMREIWXMLP4NORBANCNFSM4H3EJMRQ> .

[Malik-Adil]

The issue is resolutions.push(zoom factor); Zoom factor is not created correctly if we create the zoom factor with help of baseTotalPixelMatrixColumns / totalPixelMatrixColumns; then Resolution is created correctly.

After doing this My issue is resolved

Please update the microscope extension with this change

Thanks

[Malik-Adil]

Converted WSI Image using Dicomizer.
https://drive.google.com/open?id=1nLYeGR6M_BJDtzE9EeBaNg6z7malfQ44

I will get the wrong resolution when I view this file in Viewer. When I create the resolution using this Method

baseTotalPixelMatrixColumns / totalPixelMatrixColumns;

Resolution becomes correct but When the View reaches tileLoadFunction it gets the corrupted buffer therefor it creates a corrupted image.

[dannyrb]

After further review, this issue may be better suited for this repository: https://github.com/dcmjs-org/dicom-microscopy-viewer

[mrcolo]

Any update on this? Been experimenting with Viewer and I'm getting the same exact errors..