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tests_collections.py
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tests_collections.py
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import json
import zipfile
from celery_once import AlreadyQueued
from mock import patch, Mock, ANY
from rest_framework.exceptions import ErrorDetail
from core.collections.models import CollectionReference, Collection
from core.collections.serializers import CollectionVersionExportSerializer, CollectionReferenceSerializer
from core.collections.tests.factories import OrganizationCollectionFactory, UserCollectionFactory, ExpansionFactory
from core.common.tasks import export_collection
from core.common.tests import OCLAPITestCase
from core.common.utils import get_latest_dir_in_path, drop_version
from core.concepts.serializers import ConceptVersionExportSerializer
from core.concepts.tests.factories import ConceptFactory
from core.mappings.serializers import MappingDetailSerializer
from core.mappings.tests.factories import MappingFactory
from core.orgs.tests.factories import OrganizationFactory
from core.sources.tests.factories import OrganizationSourceFactory
from core.users.models import UserProfile
from core.users.tests.factories import UserProfileFactory
class CollectionListViewTest(OCLAPITestCase):
def test_get_200(self):
coll = OrganizationCollectionFactory(mnemonic='coll1')
expansion = ExpansionFactory(collection_version=coll)
coll.expansion_uri = expansion.uri
coll.save()
response = self.client.get(
'/collections/',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0]['short_code'], 'coll1')
self.assertEqual(response.data[0]['id'], 'coll1')
self.assertEqual(response.data[0]['url'], coll.uri)
response = self.client.get(
f'/orgs/{coll.parent.mnemonic}/collections/?verbose=true',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0]['short_code'], 'coll1')
self.assertEqual(response.data[0]['id'], 'coll1')
self.assertEqual(response.data[0]['url'], coll.uri)
for attr in ['active_concepts', 'active_mappings', 'versions', 'summary']:
self.assertFalse(attr in response.data[0])
concept = ConceptFactory()
coll.add_expressions({'expressions': [concept.uri]}, coll.created_by)
response = self.client.get(
f'/orgs/{coll.parent.mnemonic}/collections/?contains={concept.uri}'
f'&includeReferences=true',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
response = self.client.get(
f'/orgs/{coll.parent.mnemonic}/collections/?verbose=true&includeSummary=true',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0]['short_code'], 'coll1')
self.assertEqual(response.data[0]['id'], 'coll1')
self.assertEqual(response.data[0]['url'], coll.uri)
self.assertEqual(
response.data[0]['summary'],
{
'versions': 1,
'active_concepts': 1,
'active_mappings': 0,
'active_references': 1,
'expansions': 1
}
)
response = self.client.get(
f'/orgs/{coll.parent.mnemonic}/collections/?includeSummary=true',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0]['short_code'], 'coll1')
self.assertEqual(response.data[0]['id'], 'coll1')
self.assertEqual(response.data[0]['url'], coll.uri)
self.assertEqual(
response.data[0]['summary'],
{
'versions': 1,
'active_concepts': 1,
'active_mappings': 0,
'active_references': 1,
'expansions': 1
}
)
response = self.client.get(
f'/orgs/{coll.parent.mnemonic}/collections/?brief=true',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0], {'id': coll.mnemonic, 'url': coll.uri})
def test_post_201(self):
org = OrganizationFactory(mnemonic='org')
user = UserProfileFactory(organizations=[org], username='user')
response = self.client.post(
'/orgs/org/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll',
'name': 'Collection',
'mnemonic': 'coll',
'extras': {
'foo': 'bar'
}
},
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 201)
self.assertIsNotNone(response.data['uuid'])
self.assertEqual(response.data['id'], 'coll')
self.assertEqual(response.data['name'], 'Collection')
self.assertEqual(response.data['default_locale'], 'en')
self.assertEqual(response['Location'], '/orgs/org/collections/coll/')
self.assertEqual(org.collection_set.count(), 1)
response = self.client.post(
'/users/user/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll',
'name': 'Collection',
'mnemonic': 'coll',
'extras': {
'foo': 'bar'
}
},
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 201)
self.assertIsNotNone(response.data['uuid'])
self.assertEqual(response.data['id'], 'coll')
self.assertEqual(response.data['name'], 'Collection')
self.assertEqual(response.data['default_locale'], 'en')
self.assertEqual(response['Location'], '/users/user/collections/coll/')
self.assertEqual(user.collection_set.count(), 1)
org_collection = org.collection_set.first()
user_collection = user.collection_set.first()
self.assertNotEqual(org_collection.id, user_collection.id)
def test_post_201_with_autoexpand_head(self):
org = OrganizationFactory(mnemonic='org')
user = UserProfileFactory(organizations=[org], username='user')
token = user.get_token()
response = self.client.post(
'/orgs/org/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll',
'name': 'Collection',
'mnemonic': 'coll',
'extras': {
'foo': 'bar'
}
},
HTTP_AUTHORIZATION='Token ' + token,
format='json'
)
self.assertEqual(response.status_code, 201)
self.assertIsNotNone(response.data['uuid'])
collection = Collection.objects.last()
self.assertEqual(str(collection.id), response.data['uuid'])
self.assertEqual(collection.expansions.count(), 1)
expansion = collection.expansions.first()
self.assertEqual(collection.expansion_uri, expansion.uri)
self.assertEqual(collection.expansion.id, expansion.id)
self.assertEqual(collection.expansion.mnemonic, 'autoexpand-HEAD')
self.assertEqual(collection.expansion.concepts.count(), 0)
source = OrganizationSourceFactory(organization=org)
concept = ConceptFactory(parent=source)
response = self.client.put(
'/orgs/org/collections/coll/references/',
{'data': {'concepts': [concept.uri]}},
HTTP_AUTHORIZATION='Token ' + token,
format='json'
)
self.assertEqual(response.status_code, 200)
collection.refresh_from_db()
self.assertEqual(collection.references.count(), 1)
self.assertEqual(collection.expansion.concepts.count(), 1)
self.assertEqual(collection.expansion.active_concepts, 1)
self.assertEqual(collection.expansion.active_mappings, 0)
self.assertTrue(collection.references.filter(expression=concept.uri).exists())
self.assertEqual(
response.data,
[
{
'added': True,
'expression': concept.uri,
'message': 'Added the latest versions of concept to the collection. Future updates will not be '\
'added automatically.'
}
]
)
def test_post_201_with_autoexpand_head_false(self):
org = OrganizationFactory(mnemonic='org')
user = UserProfileFactory(organizations=[org], username='user')
token = user.get_token()
response = self.client.post(
'/orgs/org/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll',
'name': 'Collection',
'mnemonic': 'coll',
'extras': {
'foo': 'bar'
},
'autoexpand_head': False
},
HTTP_AUTHORIZATION='Token ' + token,
format='json'
)
self.assertEqual(response.status_code, 201)
self.assertIsNotNone(response.data['uuid'])
collection = Collection.objects.last()
self.assertEqual(str(collection.id), response.data['uuid'])
self.assertIsNone(collection.expansion_uri)
self.assertEqual(collection.expansions.count(), 0)
source = OrganizationSourceFactory(organization=org)
concept = ConceptFactory(parent=source)
response = self.client.put(
'/orgs/org/collections/coll/references/',
{'data': {'concepts': [concept.uri]}},
HTTP_AUTHORIZATION='Token ' + token,
format='json'
)
self.assertEqual(response.status_code, 200)
collection.refresh_from_db()
self.assertEqual(collection.references.count(), 1)
self.assertEqual(collection.expansions.count(), 0)
self.assertEqual(collection.active_concepts, None)
self.assertEqual(collection.active_mappings, None)
self.assertTrue(collection.references.filter(expression=concept.uri).exists())
self.assertEqual(
response.data,
[
{
'added': True,
'expression': concept.uri,
'message': 'Added the latest versions of concept to the collection. Future updates will not be' \
' added automatically.'
}
]
)
def test_post_400(self):
org = OrganizationFactory(mnemonic='org')
user = UserProfileFactory(organizations=[org])
response = self.client.post(
'/orgs/org/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll',
'extras': {
'foo': 'bar'
}
},
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 400)
self.assertEqual(response.data, {'name': [ErrorDetail(string='This field is required.', code='required')]})
self.assertEqual(org.collection_set.count(), 0)
def test_post_403(self):
OrganizationFactory(mnemonic='org')
response = self.client.post(
'/orgs/org/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll'
},
format='json'
)
self.assertEqual(response.status_code, 403)
def test_post_405(self):
response = self.client.post(
'/orgs/org/collections/',
{
'default_locale': 'en',
'supported_locales': 'en,fr',
'id': 'coll'
},
format='json'
)
self.assertEqual(response.status_code, 405)
class CollectionRetrieveUpdateDestroyViewTest(OCLAPITestCase):
def test_get_200(self):
coll = OrganizationCollectionFactory(mnemonic='coll1')
response = self.client.get(coll.uri, format='json')
self.assertEqual(response.status_code, 200)
self.assertEqual(response.data['uuid'], str(coll.id))
self.assertEqual(response.data['short_code'], 'coll1')
self.assertEqual(response.data['url'], coll.uri)
self.assertEqual(response.data['type'], 'Collection')
response = self.client.get(
coll.uri,
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(response.data['uuid'], str(coll.id))
self.assertEqual(response.data['short_code'], 'coll1')
response = self.client.get(
coll.uri + 'summary/',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(response.data['uuid'], str(coll.id))
self.assertEqual(response.data['active_concepts'], None)
self.assertEqual(response.data['active_mappings'], None)
self.assertEqual(response.data['versions'], 1)
def test_get_200_with_resources(self):
concept = ConceptFactory()
mapping = MappingFactory()
coll = OrganizationCollectionFactory(mnemonic='coll1')
expansion = ExpansionFactory(collection_version=coll)
coll.expansion_uri = expansion.uri
coll.save()
response = self.client.get(
coll.uri + '?includeConcepts=true&includeMappings=true&includeReferences=true', format='json')
self.assertEqual(response.status_code, 200)
self.assertEqual(response.data['uuid'], str(coll.id))
self.assertEqual(response.data['short_code'], 'coll1')
self.assertEqual(response.data['url'], coll.uri)
self.assertEqual(response.data['type'], 'Collection')
self.assertEqual(len(response.data['concepts']), 0)
self.assertEqual(len(response.data['mappings']), 0)
self.assertEqual(len(response.data['references']), 0)
expansion.concepts.add(concept)
expansion.mappings.add(mapping)
coll_ref = CollectionReference(expression='/foo/bar', collection=coll)
coll_ref.save()
response = self.client.get(
coll.uri + '?includeConcepts=true&includeMappings=true&includeReferences=true', format='json')
self.assertEqual(response.status_code, 200)
self.assertEqual(response.data['uuid'], str(coll.id))
self.assertEqual(response.data['short_code'], 'coll1')
self.assertEqual(response.data['url'], coll.uri)
self.assertEqual(response.data['type'], 'Collection')
self.assertEqual(len(response.data['concepts']), 1)
self.assertEqual(len(response.data['mappings']), 1)
self.assertEqual(len(response.data['references']), 1)
def test_get_404(self):
response = self.client.get(
'/orgs/foobar/collections/coll1/',
format='json'
)
self.assertEqual(response.status_code, 404)
@patch('core.common.models.delete_s3_objects')
def test_delete_204(self, delete_s3_objects_mock): # sync delete
coll = OrganizationCollectionFactory(mnemonic='coll1')
OrganizationCollectionFactory(
version='v1', is_latest_version=True, mnemonic='coll1', organization=coll.organization)
user = UserProfileFactory(organizations=[coll.organization])
self.assertEqual(coll.versions.count(), 2)
response = self.client.delete(
coll.uri + '?inline=true',
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 204)
self.assertEqual(coll.versions.count(), 0)
self.assertFalse(Collection.objects.filter(mnemonic='coll1').exists())
delete_s3_objects_mock.delay.assert_called_once_with(
f'orgs/{coll.organization.mnemonic}/{coll.organization.mnemonic}_coll1_vHEAD.')
@patch('core.collections.views.delete_collection')
def test_delete_202(self, delete_collection_task_mock): # async delete
delete_collection_task_mock.apply_async = Mock(return_value=Mock(task_id='task-id', state='PENDING'))
coll = OrganizationCollectionFactory(mnemonic='coll1')
OrganizationCollectionFactory(
version='v1', is_latest_version=True, mnemonic='coll1', organization=coll.organization)
user = UserProfileFactory(organizations=[coll.organization])
response = self.client.delete(
coll.uri + '?async=true',
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 202)
self.assertEqual(
response.data,
{'task': 'task-id', 'queue': 'default', 'state': 'PENDING', 'username': user.username}
)
delete_collection_task_mock.apply_async.assert_called_once_with((coll.id, ), task_id=ANY)
def test_put_401(self):
coll = OrganizationCollectionFactory(mnemonic='coll1', name='Collection')
self.assertEqual(coll.versions.count(), 1)
response = self.client.put(
coll.uri,
{'name': 'Collection1'},
format='json'
)
self.assertEqual(response.status_code, 401)
def test_put_200(self):
coll = OrganizationCollectionFactory(mnemonic='coll1', name='Collection')
user = UserProfileFactory(organizations=[coll.organization])
self.assertEqual(coll.versions.count(), 1)
response = self.client.put(
coll.uri,
{'name': 'Collection1'},
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(response.data['name'], 'Collection1')
coll.refresh_from_db()
self.assertEqual(coll.name, 'Collection1')
self.assertEqual(coll.versions.count(), 1)
def test_put_400(self):
coll = OrganizationCollectionFactory(mnemonic='coll1', name='Collection')
user = UserProfileFactory(organizations=[coll.organization])
self.assertEqual(coll.versions.count(), 1)
response = self.client.put(
coll.uri,
{'name': ''},
HTTP_AUTHORIZATION='Token ' + user.get_token(),
format='json'
)
self.assertEqual(response.status_code, 400)
self.assertEqual(response.data, {'name': [ErrorDetail(string='This field may not be blank.', code='blank')]})
class CollectionReferencesViewTest(OCLAPITestCase):
def setUp(self):
super().setUp()
self.user = UserProfileFactory(username='foobar')
self.token = self.user.get_token()
self.collection = UserCollectionFactory(mnemonic='coll', user=self.user)
self.expansion = ExpansionFactory(collection_version=self.collection)
self.collection.expansion_uri = self.expansion.uri
self.collection.save()
self.concept = ConceptFactory()
self.reference = CollectionReference(
expression=self.concept.uri, collection=self.collection, system=self.concept.parent.uri, version='HEAD')
self.reference.full_clean()
self.reference.save()
self.expansion.concepts.set(self.reference.concepts.all())
self.assertEqual(self.collection.references.count(), 1)
self.assertEqual(self.expansion.concepts.count(), 1)
def test_get_404(self):
response = self.client.get(
'/users/foobar/collections/foobar/references/',
format='json'
)
self.assertEqual(response.status_code, 404)
def test_get_200(self):
response = self.client.get(
self.collection.uri + 'references/',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0]['expression'], self.concept.uri)
self.assertEqual(response.data[0]['reference_type'], 'concepts')
response = self.client.get(
self.collection.uri + f'references/?q={self.concept.uri}&search_sort=desc',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
self.assertEqual(response.data[0]['expression'], self.concept.uri)
self.assertEqual(response.data[0]['reference_type'], 'concepts')
response = self.client.get(
self.collection.uri + 'references/?q=/concepts/&search_sort=desc',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 1)
response = self.client.get(
self.collection.uri + 'references/?q=/mappings/&search_sort=desc',
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 0)
def test_delete_400(self):
response = self.client.delete(
self.collection.uri + 'references/',
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 400)
@patch('core.collections.models.batch_index_resources', Mock(apply_async=Mock()))
def test_delete_204_random(self):
response = self.client.delete(
self.collection.uri + 'references/',
{'expressions': ['/foo/']},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 204)
self.assertEqual(self.collection.references.count(), 1)
self.assertEqual(self.collection.expansion.concepts.count(), 1)
@patch('core.collections.models.batch_index_resources', Mock(apply_async=Mock()))
def test_delete_204_all_expressions(self):
response = self.client.delete(
self.collection.uri + 'references/',
{'expressions': '*'},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 204)
self.assertEqual(self.collection.references.count(), 0)
self.assertEqual(self.collection.expansion.concepts.count(), 0)
@patch('core.collections.models.batch_index_resources', Mock(apply_async=Mock()))
def test_delete_204_bulk_reference_ids(self):
response = self.client.delete(
self.collection.uri + 'references/',
{'ids': [self.reference.id]},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 204)
self.assertEqual(self.collection.references.count(), 0)
self.assertEqual(self.collection.expansion.concepts.count(), 0)
@patch('core.collections.models.batch_index_resources', Mock(apply_async=Mock()))
def test_delete_204_specific_expression(self):
response = self.client.delete(
self.collection.uri + 'references/',
{
'expressions': [self.concept.uri]
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 204)
self.assertEqual(self.collection.references.count(), 0)
self.assertEqual(self.collection.expansion.concepts.count(), 0)
concept = ConceptFactory()
MappingFactory(from_concept=concept, parent=concept.parent)
response = self.client.put(
self.collection.uri + 'references/?cascade=sourcemappings',
{
'data': {'mappings': [concept.uri]}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 2)
self.assertEqual(self.collection.expansion.concepts.count(), 1)
self.assertEqual(self.collection.expansion.mappings.count(), 1)
response = self.client.delete(
self.collection.uri + 'references/',
{
'expressions': [concept.uri]
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 204)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 1)
self.assertEqual(self.collection.expansion.concepts.count(), 0)
self.assertEqual(self.collection.expansion.mappings.count(), 1)
@patch('core.collections.views.add_references')
def test_put_202_all(self, add_references_mock):
add_references_mock.apply_async = Mock(return_value=Mock(task_id='task-id', state='PENDING'))
response = self.client.put(
self.collection.uri + 'references/?async=true',
{'data': {'concepts': '*'}},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 202)
self.assertEqual(
response.data,
{'task': 'task-id', 'state': 'PENDING', 'username': self.user.username, 'queue': 'default'}
)
add_references_mock.apply_async.assert_called_once()
self.assertEqual(
add_references_mock.apply_async.call_args[0],
((self.user.id, {'concepts': '*'}, self.collection.id, '', ''),)
)
self.assertEqual(
add_references_mock.apply_async.call_args[1],
{'task_id': ANY}
)
self.assertTrue(
'-foobar~default' in add_references_mock.apply_async.call_args[1]['task_id'],
)
self.assertEqual(
len(add_references_mock.apply_async.call_args[1]['task_id']), 36 + 1 + 7 + 1 + 6
)
def test_put_200_specific_expression(self): # pylint: disable=too-many-statements
response = self.client.put(
self.collection.uri + 'references/',
{
'data': {'concepts': [self.concept.uri]}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(
response.data,
[
{
'added': False,
'expression': self.concept.uri,
'message': ['Concept or Mapping reference name must be unique in a collection.']
}
]
)
concept2 = ConceptFactory()
response = self.client.put(
self.collection.uri + 'references/',
{
'data': {
'concepts': [concept2.uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 2)
self.assertEqual(self.collection.expansion.concepts.count(), 2)
self.assertEqual(self.collection.active_concepts, 2)
self.assertEqual(self.collection.active_mappings, 0)
self.assertTrue(self.collection.references.filter(expression=concept2.uri).exists())
self.assertEqual(
response.data,
[
{
'added': True,
'expression': concept2.uri,
'message': 'Added the latest versions of concept to the collection. '
'Future updates will not be added automatically.'
}
]
)
mapping = MappingFactory(from_concept=concept2, to_concept=self.concept, parent=self.concept.parent)
response = self.client.put(
self.collection.uri + 'references/',
{
'data': {
'mappings': [mapping.uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 3)
self.assertEqual(self.collection.expansion.concepts.count(), 2)
self.assertEqual(self.collection.expansion.mappings.count(), 1)
self.assertEqual(self.collection.active_concepts, 2)
self.assertEqual(self.collection.active_mappings, 1)
self.assertTrue(self.collection.references.filter(expression=mapping.uri).exists())
self.assertEqual(
response.data,
[
{
'added': True,
'expression': mapping.uri,
'message': 'Added the latest versions of mapping to the collection.'
' Future updates will not be added automatically.'
}
]
)
concept3 = ConceptFactory()
latest_version = concept3.get_latest_version()
MappingFactory(from_concept=concept3, parent=concept3.parent)
response = self.client.put(
self.collection.uri + 'references/?cascade=sourcemappings',
{
'data': {
'concepts': [latest_version.uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 5)
self.assertEqual(self.collection.expansion.concepts.count(), 3)
self.assertEqual(self.collection.expansion.mappings.count(), 2)
self.assertEqual(self.collection.active_concepts, 3)
self.assertEqual(self.collection.active_mappings, 2)
self.assertTrue(self.collection.references.filter(expression=latest_version.uri).exists())
reference = self.collection.references.last()
self.assertTrue(reference.cascade, 'sourcemappings')
self.assertTrue(
reference.translation,
'Include latest version "330827" of concept "concept2" from org2/source2 PLUS its mappings'
)
concept4 = ConceptFactory()
latest_version = concept4.get_latest_version()
MappingFactory(from_concept=concept4, parent=concept4.parent)
response = self.client.put(
self.collection.uri + 'references/',
{
'data': {
'system': latest_version.parent.url,
'code': latest_version.mnemonic,
'resource_version': latest_version.version,
'cascade': 'sourcemappings'
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 6)
self.assertEqual(self.collection.expansion.concepts.count(), 4)
self.assertEqual(self.collection.expansion.mappings.count(), 3)
self.assertEqual(self.collection.active_concepts, 4)
self.assertEqual(self.collection.active_mappings, 3)
self.assertTrue(self.collection.references.filter(expression=latest_version.uri).exists())
response = self.client.put(
self.collection.uri + 'references/',
{
'data': {
'system': latest_version.parent.url,
'code': latest_version.mnemonic,
'resource_version': latest_version.version,
'cascade': 'sourcemappings',
'exclude': True
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.collection.refresh_from_db()
self.assertEqual(self.collection.references.count(), 7)
self.assertEqual(self.collection.expansion.concepts.count(), 3)
self.assertEqual(self.collection.expansion.mappings.count(), 2)
self.assertEqual(self.collection.active_concepts, 3)
self.assertEqual(self.collection.active_mappings, 2)
def test_put_expression_with_cascade_to_concepts(self):
source1 = OrganizationSourceFactory()
source2 = OrganizationSourceFactory()
concept1 = ConceptFactory(parent=source1, mnemonic='concept1')
concept2 = ConceptFactory(parent=source1)
concept3 = ConceptFactory(parent=source2)
concept4 = ConceptFactory(parent=source2)
mapping1 = MappingFactory(
mnemonic='m1-c1-c2-s1', from_concept=concept1.get_latest_version(),
to_concept=concept2.get_latest_version(), parent=source1
)
MappingFactory(
mnemonic='m2-c2-c1-s1', from_concept=concept2.get_latest_version(),
to_concept=concept1.get_latest_version(), parent=source1
)
MappingFactory(
mnemonic='m3-c1-c3-s2', from_concept=concept1.get_latest_version(),
to_concept=concept3.get_latest_version(), parent=source2
)
mapping4 = MappingFactory(
mnemonic='m4-c4-c3-s2', from_concept=concept4.get_latest_version(),
to_concept=concept3.get_latest_version(), parent=source2
)
MappingFactory(
mnemonic='m5-c4-c1-s1', from_concept=concept4.get_latest_version(),
to_concept=concept1.get_latest_version(), parent=source1
)
response = self.client.put(
self.collection.uri + 'references/?cascade=sourceToConcepts',
{
'data': {
'concepts': [concept1.get_latest_version().uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 3)
self.assertTrue(all(data['added'] for data in response.data))
self.assertEqual(
sorted([data['expression'] for data in response.data]),
sorted([
concept1.get_latest_version().uri, mapping1.uri,
mapping1.to_concept.versioned_object.uri
])
)
reference = self.collection.references.last()
self.assertEqual(reference.cascade, 'sourcetoconcepts')
self.assertEqual(
reference.translation,
f'Include version "{concept1.get_latest_version().version}" of concept "concept1" from {concept1.parent.parent.mnemonic}/{concept1.parent.mnemonic} PLUS its mappings and their target concepts' # pylint: disable=line-too-long
)
response = self.client.put(
self.collection.uri + 'references/?cascade=sourceToConcepts',
{
'data': {
'concepts': [concept4.get_latest_version().uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(len(response.data), 3)
self.assertTrue(all(data['added'] for data in response.data))
self.assertEqual(
sorted([data['expression'] for data in response.data]),
sorted([
concept4.get_latest_version().uri, mapping4.uri,
mapping4.to_concept.versioned_object.uri
])
)
def test_put_expression_transform_to_latest_version(self):
concept2 = ConceptFactory()
concept2_latest_version = concept2.get_latest_version()
concept3 = ConceptFactory()
concept3_latest_version = concept3.get_latest_version()
self.assertNotEqual(concept2.uri, concept2_latest_version.uri)
self.assertNotEqual(concept3.uri, concept3_latest_version.uri)
response = self.client.put(
self.collection.uri + 'references/?transformReferences=resourceVersions',
{
'data': {
'concepts': [concept2.uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(
response.data,
[
{
'added': True,
'expression': concept2_latest_version.uri,
'message': ANY
}
]
)
response = self.client.put(
self.collection.uri + 'references/',
{
'data': {
'concepts': [concept3.uri]
}
},
HTTP_AUTHORIZATION='Token ' + self.token,
format='json'
)
self.assertEqual(response.status_code, 200)
self.assertEqual(
response.data,
[
{
'added': True,
'expression': concept3.uri,
'message': ANY
}
]
)
self.assertFalse(self.collection.references.filter(expression=concept2.uri).exists())
self.assertFalse(self.collection.references.filter(expression=concept3_latest_version.uri).exists())
self.assertTrue(self.collection.references.filter(expression=concept2_latest_version.uri).exists())
self.assertTrue(self.collection.references.filter(expression=concept3.uri).exists())
def test_put_expression_cascade_and_transform_to_generate_multiple_references(self):
source = OrganizationSourceFactory()
concept2 = ConceptFactory(parent=source)
concept2_latest_version = concept2.get_latest_version()
concept3 = ConceptFactory(parent=source)
concept3_latest_version = concept3.get_latest_version()
mapping = MappingFactory(from_concept=concept2, to_concept=concept3, parent=source)