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models.py
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models.py
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import uuid
from dirtyfields import DirtyFieldsMixin
from django.core.exceptions import ValidationError
from django.db import models
from django.db.models import UniqueConstraint, F, Max
from pydash import compact, get
from core.common.models import ConceptContainerModel
from core.common.services import PostgresQL
from core.common.validators import validate_non_negative
from core.concepts.models import LocalizedText
from core.sources.constants import SOURCE_TYPE, SOURCE_VERSION_TYPE, HIERARCHY_ROOT_MUST_BELONG_TO_SAME_SOURCE, \
HIERARCHY_MEANINGS, AUTO_ID_CHOICES, AUTO_ID_SEQUENTIAL, AUTO_ID_UUID
class Source(DirtyFieldsMixin, ConceptContainerModel):
DEFAULT_AUTO_ID_START_FROM = 1
es_fields = {
'source_type': {'sortable': True, 'filterable': True, 'facet': True, 'exact': True},
'mnemonic': {'sortable': True, 'filterable': True, 'exact': True},
'name': {'sortable': True, 'filterable': True, 'exact': True},
'last_update': {'sortable': True, 'filterable': False, 'default': 'desc'},
'locale': {'sortable': False, 'filterable': True, 'facet': True},
'owner': {'sortable': True, 'filterable': True, 'facet': True, 'exact': True},
'owner_type': {'sortable': False, 'filterable': True, 'facet': True},
'custom_validation_schema': {'sortable': False, 'filterable': True, 'facet': True},
'canonical_url': {'sortable': True, 'filterable': True, 'exact': True},
'experimental': {'sortable': False, 'filterable': False, 'facet': False},
'hierarchy_meaning': {'sortable': False, 'filterable': True, 'facet': True},
'external_id': {'sortable': False, 'filterable': True, 'facet': False, 'exact': True},
}
class Meta:
db_table = 'sources'
constraints = [
UniqueConstraint(
fields=['mnemonic', 'version', 'organization'],
name="org_source_unique",
condition=models.Q(user=None),
),
UniqueConstraint(
fields=['mnemonic', 'version', 'user'],
name="user_source_unique",
condition=models.Q(organization=None),
)
]
indexes = [] + ConceptContainerModel.Meta.indexes
# + index on UPPER(mnemonic) in custom migration 0022
source_type = models.TextField(blank=True, null=True)
content_type = models.TextField(blank=True, null=True)
collection_reference = models.CharField(null=True, blank=True, max_length=100)
hierarchy_meaning = models.CharField(null=True, blank=True, max_length=50, choices=HIERARCHY_MEANINGS)
case_sensitive = models.BooleanField(null=True, blank=True, default=None)
compositional = models.BooleanField(null=True, blank=True, default=None)
version_needed = models.BooleanField(null=True, blank=True, default=None)
hierarchy_root = models.ForeignKey('concepts.Concept', null=True, blank=True, on_delete=models.SET_NULL)
# auto-id
autoid_concept_mnemonic = models.CharField(null=True, blank=True, choices=AUTO_ID_CHOICES, max_length=10)
autoid_concept_external_id = models.CharField(null=True, blank=True, choices=AUTO_ID_CHOICES, max_length=10)
autoid_mapping_mnemonic = models.CharField(
null=True, blank=True, choices=AUTO_ID_CHOICES, max_length=10, default=AUTO_ID_SEQUENTIAL)
autoid_mapping_external_id = models.CharField(null=True, blank=True, choices=AUTO_ID_CHOICES, max_length=10)
autoid_concept_mnemonic_start_from = models.IntegerField(
default=DEFAULT_AUTO_ID_START_FROM, validators=[validate_non_negative])
autoid_concept_external_id_start_from = models.IntegerField(
default=DEFAULT_AUTO_ID_START_FROM, validators=[validate_non_negative])
autoid_mapping_mnemonic_start_from = models.IntegerField(
default=DEFAULT_AUTO_ID_START_FROM, validators=[validate_non_negative])
autoid_mapping_external_id_start_from = models.IntegerField(
default=DEFAULT_AUTO_ID_START_FROM, validators=[validate_non_negative])
OBJECT_TYPE = SOURCE_TYPE
OBJECT_VERSION_TYPE = SOURCE_VERSION_TYPE
@property
def is_sequential_concept_mnemonic(self):
return self.autoid_concept_mnemonic == AUTO_ID_SEQUENTIAL
@property
def is_sequential_concept_external_id(self):
return self.autoid_concept_external_id == AUTO_ID_SEQUENTIAL
@property
def is_sequential_mapping_mnemonic(self):
return self.autoid_mapping_mnemonic == AUTO_ID_SEQUENTIAL
@property
def is_sequential_mapping_external_id(self):
return self.autoid_mapping_external_id == AUTO_ID_SEQUENTIAL
@property
def concept_mnemonic_next(self):
return self.get_resource_next_attr_id(self.autoid_concept_mnemonic, self.concepts_mnemonic_seq_name)
@property
def concept_external_id_next(self):
return self.get_resource_next_attr_id(self.autoid_concept_external_id, self.concepts_external_id_seq_name)
@property
def mapping_mnemonic_next(self):
try:
return self.get_resource_next_attr_id(self.autoid_mapping_mnemonic, self.mappings_mnemonic_seq_name)
except: # pylint: disable=bare-except
return None
@property
def mapping_external_id_next(self):
return self.get_resource_next_attr_id(self.autoid_mapping_external_id, self.mappings_external_id_seq_name)
@staticmethod
def get_resource_next_attr_id(attr_type, seq):
if attr_type == AUTO_ID_UUID:
return uuid.uuid4()
if attr_type == AUTO_ID_SEQUENTIAL:
return str(PostgresQL.next_value(seq))
return None
@staticmethod
def get_search_document():
from core.sources.documents import SourceDocument
return SourceDocument
@classmethod
def get_base_queryset(cls, params):
source = params.pop('source', None)
queryset = super().get_base_queryset(params)
if source:
queryset = queryset.filter(cls.get_exact_or_criteria('mnemonic', source))
return queryset
@staticmethod
def get_resource_url_kwarg():
return 'source'
@property
def source(self):
return self.mnemonic
def update_version_data(self, head):
super().update_version_data(head)
self.source_type = head.source_type
self.content_type = head.content_type
self.collection_reference = head.collection_reference
self.hierarchy_meaning = head.hierarchy_meaning
self.hierarchy_root_id = head.hierarchy_root_id
self.case_sensitive = head.case_sensitive
self.compositional = head.compositional
self.version_needed = head.version_needed
def get_concept_name_locales(self):
return LocalizedText.objects.filter(name_locales__in=self.get_active_concepts())
def is_validation_necessary(self):
origin_source = self.get_latest_version()
if origin_source.custom_validation_schema == self.custom_validation_schema:
return False
return self.custom_validation_schema is not None and self.active_concepts
def update_mappings(self):
from core.mappings.models import Mapping
uris = compact([self.uri, self.canonical_url])
for mapping in Mapping.objects.filter(to_source__isnull=True, to_source_url__in=uris):
mapping.to_source = self
mapping.save()
for mapping in Mapping.objects.filter(from_source__isnull=True, from_source_url__in=uris):
mapping.from_source = self
mapping.save()
def is_hierarchy_root_belonging_to_self(self):
hierarchy_root = self.hierarchy_root
if self.is_head:
return hierarchy_root.parent_id == self.id
return hierarchy_root.parent_id == self.head.id
def clean(self):
super().clean()
if self.hierarchy_root_id and not self.is_hierarchy_root_belonging_to_self():
raise ValidationError({'hierarchy_root': [HIERARCHY_ROOT_MUST_BELONG_TO_SAME_SOURCE]})
def get_parentless_concepts(self):
return self.concepts.filter(parent_concepts__isnull=True, id=F('versioned_object_id'))
def hierarchy(self, offset=0, limit=100):
from core.concepts.serializers import ConceptHierarchySerializer
hierarchy_root = None
if offset == 0:
hierarchy_root = self.hierarchy_root
parent_less_children = self.get_parentless_concepts()
if hierarchy_root:
parent_less_children = parent_less_children.exclude(mnemonic=hierarchy_root.mnemonic)
total_count = parent_less_children.count()
adjusted_limit = limit
if hierarchy_root:
adjusted_limit -= 1
parent_less_children = parent_less_children.order_by('mnemonic')[offset:adjusted_limit+offset]
children = []
if parent_less_children.exists():
children = ConceptHierarchySerializer(parent_less_children, many=True).data
if hierarchy_root:
children.append({**ConceptHierarchySerializer(hierarchy_root).data, 'root': True})
return dict(
id=self.mnemonic,
children=children,
count=total_count + (1 if hierarchy_root else 0),
offset=offset,
limit=limit
)
def set_active_concepts(self):
queryset = self.concepts.filter(retired=False, is_active=True)
if self.is_head:
queryset = queryset.filter(id=F('versioned_object_id'))
self.active_concepts = queryset.count()
def set_active_mappings(self):
queryset = self.mappings.filter(retired=False, is_active=True)
if self.is_head:
queryset = queryset.filter(id=F('versioned_object_id'))
self.active_mappings = queryset.count()
def seed_concepts(self, index=True):
head = self.head
if head:
self.concepts.set(head.concepts.filter(is_latest_version=True))
if index:
from core.concepts.documents import ConceptDocument
self.batch_index(self.concepts, ConceptDocument)
def seed_mappings(self, index=True):
head = self.head
if head:
self.mappings.set(head.mappings.filter(is_latest_version=True))
if index:
from core.mappings.documents import MappingDocument
self.batch_index(self.mappings, MappingDocument)
def index_children(self):
from core.concepts.documents import ConceptDocument
from core.mappings.documents import MappingDocument
self.batch_index(self.concepts, ConceptDocument)
self.batch_index(self.mappings, MappingDocument)
def __get_resource_db_sequence_prefix(self):
return self.uri.replace('/', '_').replace('-', '_').replace('.', '_').replace('@', '_')
@property
def concepts_mnemonic_seq_name(self):
prefix = self.__get_resource_db_sequence_prefix()
return f"{prefix}_concepts_mnemonic_seq"
@property
def concepts_external_id_seq_name(self):
prefix = self.__get_resource_db_sequence_prefix()
return f"{prefix}_concepts_external_id_seq"
@property
def mappings_mnemonic_seq_name(self):
prefix = self.__get_resource_db_sequence_prefix()
return f"{prefix}_mappings_mnemonic_seq"
@property
def mappings_external_id_seq_name(self):
prefix = self.__get_resource_db_sequence_prefix()
return f"{prefix}_mappings_external_id_seq"
def save(
self, force_insert=False, force_update=False, using=None, update_fields=None
):
is_new = not self.id
dirty_fields = self.get_dirty_fields()
super().save(force_insert=force_insert, force_update=force_update, using=using, update_fields=update_fields)
if self.id and self.is_head:
if is_new:
self.__create_sequences()
else:
self.__update_sequences(dirty_fields)
def __update_sequences(self, dirty_fields=[]): # pylint: disable=dangerous-default-value
def should_update(is_seq, field, start_from):
return field in dirty_fields and is_seq and start_from and start_from > 0
def to_seq(start_from):
return int(start_from) - 1
if should_update(
self.is_sequential_mapping_mnemonic, 'autoid_mapping_mnemonic_start_from',
self.autoid_mapping_mnemonic_start_from
):
PostgresQL.update_seq(self.mappings_mnemonic_seq_name, to_seq(self.autoid_mapping_mnemonic_start_from))
if should_update(
self.is_sequential_mapping_external_id, 'autoid_mapping_external_id_start_from',
self.autoid_mapping_external_id_start_from
):
PostgresQL.update_seq(
self.mappings_external_id_seq_name, to_seq(self.autoid_mapping_external_id_start_from))
if should_update(
self.is_sequential_concept_mnemonic, 'autoid_concept_mnemonic_start_from',
self.autoid_concept_mnemonic_start_from
):
PostgresQL.update_seq(self.concepts_mnemonic_seq_name, to_seq(self.autoid_concept_mnemonic_start_from))
if should_update(
self.is_sequential_concept_external_id, 'autoid_concept_external_id_start_from',
self.autoid_concept_external_id_start_from
):
PostgresQL.update_seq(
self.concepts_external_id_seq_name, to_seq(self.autoid_concept_external_id_start_from))
def __create_sequences(self):
if self.is_sequential_concept_mnemonic:
PostgresQL.create_seq(
self.concepts_mnemonic_seq_name, 'sources.uri', 0, self.autoid_concept_mnemonic_start_from
)
if self.is_sequential_mapping_mnemonic:
PostgresQL.create_seq(
self.mappings_mnemonic_seq_name, 'sources.uri', 0, self.autoid_mapping_mnemonic_start_from
)
if self.is_sequential_concept_external_id:
PostgresQL.create_seq(
self.concepts_external_id_seq_name, 'sources.uri', 0, self.autoid_concept_external_id_start_from
)
if self.is_sequential_mapping_external_id:
PostgresQL.create_seq(
self.mappings_external_id_seq_name, 'sources.uri', 0, self.autoid_mapping_external_id_start_from
)
def post_delete_actions(self):
if self.is_head:
PostgresQL.drop_seq(self.concepts_mnemonic_seq_name)
PostgresQL.drop_seq(self.concepts_external_id_seq_name)
PostgresQL.drop_seq(self.mappings_mnemonic_seq_name)
PostgresQL.drop_seq(self.mappings_external_id_seq_name)
@property
def last_concept_update(self):
queryset = self.concepts_set.filter(id=F('versioned_object_id')) if self.is_head else self.concepts
return get(queryset.aggregate(max_updated_at=Max('updated_at')), 'max_updated_at', None)
@property
def last_mapping_update(self):
queryset = self.mappings_set.filter(id=F('versioned_object_id')) if self.is_head else self.mappings
return get(queryset.aggregate(max_updated_at=Max('updated_at')), 'max_updated_at', None)
def get_mapped_sources(self):
"""Returns only direct mapped sources"""
mappings = self.mappings.exclude(to_source_id=self.id)
mappings = mappings.order_by('to_source_id').distinct('to_source_id')
return Source.objects.filter(id__in=mappings.values_list('to_source_id', flat=True))