Admixture-King (#76)

* grm_admixture: REAP (ADMIXTURE-KING) method for calculating GRM * re-run docs on Linux with CUDA * bug fix by @juhkim111: in REAP method, when inferred minor allele frequency is <=0.01, the genotype is treated as missing; after this fix, ACCORD kinship estimates are much more reasonable * re-run docs notebook on Mac * re-run docs notebook on Linux (for GPU)
OpenMendel · Aug 19, 2020 · d56df9d · d56df9d
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diff --git a/Project.toml b/Project.toml
@@ -19,6 +19,7 @@ LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 LoopVectorization = "bdcacae8-1622-11e9-2a5c-532679323890"
 Missings = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
 Mmap = "a63ad114-7e13-5084-954f-fe012c677804"
+Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 Requires = "ae029012-a4dd-5104-9daa-d747884805df"
 SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"