Update notebooks

OpenSMFS · Jan 9, 2015 · d57b1b4 · d57b1b4
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/notebooks/Example - usALEX histogram.ipynb b/notebooks/Example - usALEX histogram.ipynb
@@ -1,7 +1,7 @@
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  "metadata": {
   "name": "",
-  "signature": "sha256:9b41ada29ed52e10690e64445528d86a355a3df42eb43b7c5c6a98b312438163"
+  "signature": "sha256:9a3ced672cdc06dbe2a9a1dad488edfb625f0d072e48996ed258470026951a56"
  },
  "nbformat": 3,
  "nbformat_minor": 0,
@@ -150,7 +150,7 @@
       "d = loader.hdf5(fname=full_fname)\n",
       "d.add(det_donor_accept=(0, 1), alex_period=4000, D_ON=(2850, 580), A_ON=(900, 2580))\n",
       "bpl.plot_alternation_hist(d)\n",
-      "loader.usalex_apply_period(d)\n",
+      "loader.alex_apply_period(d)\n",
       "d.calc_bg(bg.exp_fit, time_s=1000, tail_min_us=(800, 4000, 1500, 1000, 3000))"
      ],
      "language": "python",

diff --git a/notebooks/FRETBursts - us-ALEX smFRET burst analysis.ipynb b/notebooks/FRETBursts - us-ALEX smFRET burst analysis.ipynb
@@ -1,7 +1,7 @@
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-  "signature": "sha256:8e56c3e8eb46a7e22b4d60d3464c71b68128227e877345e334c4fc9832d97733"
+  "signature": "sha256:e47c2992a435f1b473c13815a6695fbc93d24d5a37c55f57f97e79bd94007e28"
  },
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  "nbformat_minor": 0,
@@ -1292,8 +1292,8 @@
      "cell_type": "code",
      "collapsed": false,
      "input": [
-      "ax = dplot(d_high_fret, hist_width, bins=r_[0:10:0.2], color='g')\n",
-      "dplot(d_low_fret, hist_width, bins=r_[0:10:0.2], ax=ax, color='r')\n",
+      "ax = dplot(d_high_fret, hist_width, bins=(0, 10, 0.2))\n",
+      "dplot(d_low_fret, hist_width, bins=(0, 10, 0.2), ax=ax)\n",
       "plt.legend(['High-FRET population', 'Low-FRET population'])"
      ],
      "language": "python",