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pin owslib to 0.21 to avoid timeout bug in 0.22 #349

Merged
merged 1 commit into from
Feb 1, 2021
Merged

pin owslib to 0.21 to avoid timeout bug in 0.22 #349

merged 1 commit into from
Feb 1, 2021

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huard
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@huard huard commented Feb 1, 2021 •
edited by tlvu

OWSLib timeout bug geopython/OWSLib#737

@huard huard requested review from cjauvin and tlvu February 1, 2021 14:27
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huard commented Feb 1, 2021

@cjauvin
owslib is not in the environment for ravenpy, correct ? Probably should be set explicitly.

tlvu
tlvu approved these changes Feb 1, 2021
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All the AttributeError: 'WebCoverageService_2_0_1' object has no attribute 'timeout' are gone.

make test-notebooks failures goes down from 36 failures to 20.

============================================================== short test summary info ==============================================================$
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 8                                                                               
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 9                                                                               
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 10                                                                              
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 11                                                                              
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 13                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 17                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 18                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 19                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 20                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 21                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 3                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 4                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 5                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 6                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 7                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 8                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 9                                                                                    
FAILED docs/source/notebooks/Region_selection.ipynb::Cell 7                                                                                           
FAILED docs/source/notebooks/Region_selection.ipynb::Cell 8                                                                                           
FAILED docs/source/notebooks/Subset_climate_data_over_watershed.ipynb::Cell 5                                                                         
========================================= 20 failed, 144 passed, 2 skipped, 1 warning in 2807.05s (0:46:47) =========================================$
Makefile:195: recipe for target 'test-notebooks' failed

@tlvu tlvu merged commit d4037a5 into master Feb 1, 2021
@tlvu tlvu deleted the pin-owslib branch February 1, 2021 15:56
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tlvu commented Feb 1, 2021

@huard Sorry have to rush merge this one. I need it to trigger a DockerHub build to test the real docker image. All the testings so far have been on our local machine. The production Raven and Jupyter image are not tested yet !

@tlvu tlvu mentioned this pull request Feb 19, 2021
Merged
tlvu added a commit to Ouranosinc/PAVICS-e2e-workflow-tests that referenced this pull request Feb 19, 2021
@tlvu
Merge pull request #61 from Ouranosinc/add-xesmf-to-jupyter-env
bb5aeec 
docker: add xESMF to Jupyter env

For regridding notebook, see Ouranosinc/pavics-sdi#201 (comment).

Also unpin `owslib` (broke xarray) and `cftime` (timeout bug) pinned in previous release (#60).

This new Jupyter env is deployed to https://medus.ouranos.ca/jupyter so you can test out xESMF.

Jenkins build with Raven notebooks enabled: http://jenkins.ouranos.ca/job/PAVICS-e2e-workflow-tests/job/test-nbval-lax-DO_NOT_MERGE/13/console

That 12 mins 45 sec includes all Raven, Finch and Pavics-sdi notebooks.  It's against my devel server lvupavicsmaster.ouranos.ca since Boreas currently have a performance problem (bird-house/birdhouse-deploy#123) and would take too long to run all Raven notebooks.

Raven failures are known, compared to Ouranosinc/raven#349 (review).

```
12:33:56  =========================== short test summary info ============================
12:33:56  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 8
12:33:56  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 9
12:33:56  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 10
12:33:56  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 11
12:33:56  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 18
12:33:56  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 19
12:33:56  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 20
12:33:56  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 21
12:33:56  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 22
12:33:56  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 1
12:33:56  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 3
12:33:56  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 4
12:33:56  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 5
12:33:56  FAILED raven-master/docs/source/notebooks/Region_selection.ipynb::Cell 7
12:33:56  FAILED raven-master/docs/source/notebooks/Region_selection.ipynb::Cell 8
12:33:56  FAILED raven-master/docs/source/notebooks/Subset_climate_data_over_watershed.ipynb::Cell 5
12:33:56  ============ 16 failed, 234 passed, 2 skipped in 765.72s (0:12:45) =============
```

Jenkins build against prod Boreas: http://jenkins.ouranos.ca/job/PAVICS-e2e-workflow-tests/job/test-nbval-lax-DO_NOT_MERGE/15/console (performance problem seems to have improved, not sure what has changed on Prod, the whole testsuite used to take around 30 mins before).

```
16:52:37  =========================== short test summary info ============================
16:52:37  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 8
16:52:37  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 9
16:52:37  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 10
16:52:37  FAILED raven-master/docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 11
16:52:37  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 18
16:52:37  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 19
16:52:37  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 20
16:52:37  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 21
16:52:37  FAILED raven-master/docs/source/notebooks/Full_process_example_1.ipynb::Cell 22
16:52:37  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 1
16:52:37  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 3
16:52:37  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 4
16:52:37  FAILED raven-master/docs/source/notebooks/Multiple_watersheds_simulation.ipynb::Cell 5
16:52:37  FAILED raven-master/docs/source/notebooks/Region_selection.ipynb::Cell 7
16:52:37  FAILED raven-master/docs/source/notebooks/Region_selection.ipynb::Cell 8
16:52:37  FAILED raven-master/docs/source/notebooks/Subset_climate_data_over_watershed.ipynb::Cell 5
16:52:37  ============ 16 failed, 234 passed, 2 skipped in 1012.44s (0:16:52) ============
```

Noticeable changes:

```diff
>   - xesmf=0.5.2=pyhd8ed1ab_0

<   - owslib=0.21.0=pyhd8ed1ab_0
>   - owslib=0.23.0=pyhd8ed1ab_0

<   - cftime=1.3.1=py37h6323ea4_0
>   - cftime=1.4.1=py37h902c9e0_0

<   - dask=2021.1.1=pyhd8ed1ab_0
>   - dask=2021.2.0=pyhd8ed1ab_0 

<   - rioxarray=0.1.1=pyhd8ed1ab_0
>   - rioxarray=0.2.0=pyhd8ed1ab_0
```

Full `conda env export` diff:
[210201.2-210216-conda-env-export.diff.txt](https://github.com/Ouranosinc/PAVICS-e2e-workflow-tests/files/6012490/210201.2-210216-conda-env-export.diff.txt)
```diff
10c10
<   - alembic=1.5.3=pyhd8ed1ab_0
---
>   - alembic=1.5.4=pyhd8ed1ab_0
12c12
<   - anyio=2.0.2=py37h89c1867_4
---
>   - anyio=2.1.0=py37h89c1867_0
21c21
<   - bleach=3.2.3=pyh44b312d_0
---
>   - bleach=3.3.0=pyh44b312d_0
38c38
<   - cartopy=0.18.0=py37h623d01f_7
---
>   - cartopy=0.18.0=py37h02548d7_10
45c45
<   - cffi=1.14.4=py37hc58025e_1
---
>   - cffi=1.14.5=py37hc58025e_0
48c48
<   - cftime=1.3.1=py37h6323ea4_0
---
>   - cftime=1.4.1=py37h902c9e0_0
60c60
<   - cryptography=3.3.1=py37h7f0c10b_1
---
>   - cryptography=3.4.4=py37hf1a17b8_0
69,70c69,70
<   - dask=2021.1.1=pyhd8ed1ab_0
<   - dask-core=2021.1.1=pyhd8ed1ab_0
---
>   - dask=2021.2.0=pyhd8ed1ab_0
>   - dask-core=2021.2.0=pyhd8ed1ab_0
79c79
<   - distributed=2021.1.1=py37h89c1867_0
---
>   - distributed=2021.2.0=py37h89c1867_0
98c98
<   - gdal=3.1.4=py37h2ec2946_2
---
>   - gdal=3.1.4=py37h2ec2946_5
102,103c102,103
<   - geos=3.8.1=he1b5a44_0
<   - geotiff=1.6.0=h5d11630_3
---
>   - geos=3.9.0=h9c3ff4c_0
>   - geotiff=1.6.0=h2b14fbe_4
110,112c110,112
<   - gitpython=3.1.12=pyhd8ed1ab_0
<   - glib=2.66.4=hc4f0c31_2
<   - glib-tools=2.66.4=hc4f0c31_2
---
>   - gitpython=3.1.13=pyhd8ed1ab_0
>   - glib=2.66.7=h9c3ff4c_0
>   - glib-tools=2.66.7=h9c3ff4c_0
117c117
<   - h5netcdf=0.8.1=py_0
---
>   - h5netcdf=0.10.0=pyhd8ed1ab_0
134c134
<   - ipython=7.19.0=py37h888b3d9_2
---
>   - ipython=7.20.0=py37h888b3d9_2
139c139
<   - jedi=0.17.2=py37h89c1867_1
---
>   - jedi=0.18.0=py37h89c1867_2
141c141
<   - joblib=1.0.0=pyhd8ed1ab_0
---
>   - joblib=1.0.1=pyhd8ed1ab_0
154c154
<   - jupyter_server=1.2.3=py37h89c1867_1
---
>   - jupyter_server=1.3.0=py37h89c1867_0
163c163
<   - jupytext=1.9.1=pyhd3deb0d_1
---
>   - jupytext=1.10.0=pyh44b312d_0
165c165
<   - kealib=1.4.14=h0042707_0
---
>   - kealib=1.4.14=he4dc956_1
170c170
<   - lcms2=2.11=hcbb858e_1
---
>   - lcms2=2.12=hddcbb42_0
180c180
<   - libdap4=3.20.6=h1d1bd15_1
---
>   - libdap4=3.20.6=hd7c4107_1
189c189
<   - libgdal=3.1.4=h02eeb80_2
---
>   - libgdal=3.1.4=h0a4f56a_5
192c192
<   - libglib=2.66.4=h748fe8e_2
---
>   - libglib=2.66.7=h1f3bc88_0
196c196
<   - libkml=1.3.0=h74f7ee3_1012
---
>   - libkml=1.3.0=h02e6976_1012
201c201
<   - libnghttp2=1.41.0=h8cfc5f6_2
---
>   - libnghttp2=1.43.0=h812cca2_0
205a206
>   - librttopo=1.1.0=hccdd1c9_5
207,208c208,209
<   - libspatialindex=1.9.3=he1b5a44_3
<   - libspatialite=5.0.0=heaf302f_0
---
>   - libspatialindex=1.9.3=h9c3ff4c_3
>   - libspatialite=5.0.1=h04c9dda_2
228c229
<   - markdown-it-py=0.6.1=pyhd8ed1ab_0
---
>   - markdown-it-py=0.6.2=pyhd8ed1ab_0
232c233
<   - mdit-py-plugins=0.2.4=pyhd8ed1ab_0
---
>   - mdit-py-plugins=0.2.5=pyhd8ed1ab_0
236c237
<   - more-itertools=8.6.0=pyhd8ed1ab_0
---
>   - more-itertools=8.7.0=pyhd8ed1ab_0
242c243
<   - nbclient=0.5.1=py_0
---
>   - nbclient=0.5.2=pyhd8ed1ab_0
244c245
<   - nbformat=5.1.2=pyhd8ed1ab_1
---
>   - nbformat=5.0.8=py_0
250c251
<   - netcdf4=1.5.5.1=nompi_py37hdbee05a_101
---
>   - netcdf4=1.5.6=nompi_py37hdbee05a_100
258c259
<   - numpy=1.20.0=py37haa41c4c_0
---
>   - numpy=1.20.1=py37haa41c4c_0
265c266
<   - owslib=0.21.0=pyhd8ed1ab_0
---
>   - owslib=0.23.0=pyhd8ed1ab_0
267c268
<   - packaging=20.8=pyhd3deb0d_0
---
>   - packaging=20.9=pyh44b312d_0
269c270
<   - pandas=1.2.1=py37hdc94413_0
---
>   - pandas=1.2.2=py37hdc94413_0
274c275
<   - parso=0.7.1=pyh9f0ad1d_0
---
>   - parso=0.8.1=pyhd8ed1ab_0
280c281
<   - pillow=8.1.0=py37he6b4880_1
---
>   - pillow=8.1.0=py37h4600e1f_2
290c291
<   - proj=7.1.1=h966b41f_3
---
>   - proj=7.2.0=h277dcde_2
292,293c293,294
<   - prompt-toolkit=3.0.14=pyha770c72_0
<   - prompt_toolkit=3.0.14=hd8ed1ab_0
---
>   - prompt-toolkit=3.0.16=pyha770c72_0
>   - prompt_toolkit=3.0.16=hd8ed1ab_0
305c306
<   - pygments=2.7.4=pyhd8ed1ab_0
---
>   - pygments=2.8.0=pyhd8ed1ab_0
309c310
<   - pyproj=2.6.1.post1=py37h6415a23_3
---
>   - pyproj=3.0.0.post1=py37hf874b97_0
319c320
<   - python=3.7.9=hffdb5ce_0_cpython
---
>   - python=3.7.9=hffdb5ce_100_cpython
328c329
<   - pyzmq=22.0.1=py37h499b945_0
---
>   - pyzmq=22.0.3=py37h499b945_0
337c338
<   - rioxarray=0.1.1=pyhd8ed1ab_0
---
>   - rioxarray=0.2.0=pyhd8ed1ab_0
347c348
<   - shapely=1.7.1=py37hba0730f_1
---
>   - shapely=1.7.1=py37h4c50fd9_2
356c357
<   - sqlalchemy=1.3.22=py37h5e8e339_1
---
>   - sqlalchemy=1.3.23=py37h5e8e339_0
358c359
<   - statsmodels=0.12.1=py37h902c9e0_2
---
>   - statsmodels=0.12.2=py37h902c9e0_0
364,365c365,366
<   - tifffile=2021.1.14=pyhd8ed1ab_0
<   - tiledb=2.1.6=h91fcb0e_1
---
>   - tifffile=2021.2.1=pyhd8ed1ab_0
>   - tiledb=2.2.3=h91fcb0e_0
370c371
<   - tqdm=4.56.0=pyhd8ed1ab_0
---
>   - tqdm=4.56.2=pyhd8ed1ab_0
391,392c392,394
<   - xeus=1.0.0=h78d96c3_0
<   - xeus-python=0.10.2=py37h52ea871_0
---
>   - xesmf=0.5.2=pyhd8ed1ab_0
>   - xeus=1.0.1=h78d96c3_0
>   - xeus-python=0.11.0=py37h52ea871_0
406c408
<   - zeromq=4.3.3=h58526e2_3
---
>   - zeromq=4.3.4=h9c3ff4c_0
```

Full new `conda env export`:
[210216-conda-env-export.yml.txt](https://github.com/Ouranosinc/PAVICS-e2e-workflow-tests/files/6012491/210216-conda-env-export.yml.txt)
```
name: birdy
channels:
  - cdat
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=1_gnu
  - affine=2.3.0=py_0
  - alembic=1.5.4=pyhd8ed1ab_0
  - ansi2html=1.6.0=py37h89c1867_1
  - anyio=2.1.0=py37h89c1867_0
  - appdirs=1.4.4=pyh9f0ad1d_0
  - argon2-cffi=20.1.0=py37h5e8e339_2
  - async_generator=1.10=py_0
  - attrs=20.3.0=pyhd3deb0d_0
  - backcall=0.2.0=pyh9f0ad1d_0
  - backports=1.0=py_2
  - backports.functools_lru_cache=1.6.1=py_0
  - beautifulsoup4=4.9.3=pyhb0f4dca_0
  - bleach=3.3.0=pyh44b312d_0
  - blinker=1.4=py_1
  - blosc=1.21.0=h9c3ff4c_0
  - bokeh=2.2.3=py37h89c1867_0
  - boltons=20.2.1=pyh9f0ad1d_0
  - boost-cpp=1.74.0=hc6e9bd1_2
  - bottleneck=1.3.2=py37h902c9e0_3
  - branca=0.4.2=pyhd8ed1ab_0
  - brotli=1.0.9=h9c3ff4c_4
  - brotli-python=1.0.9=py37hcd2ae1e_4
  - brotlipy=0.7.0=py37h5e8e339_1001
  - brunsli=0.1=h9c3ff4c_0
  - bzip2=1.0.8=h7f98852_4
  - c-ares=1.17.1=h36c2ea0_0
  - ca-certificates=2020.12.5=ha878542_0
  - cached-property=1.5.1=py_0
  - cairo=1.16.0=h7979940_1007
  - cartopy=0.18.0=py37h02548d7_10
  - cdat_info=8.2.1=pyh9f0ad1d_1
  - cdtime=3.1.4=py37h5ad02f4_2
  - cdutil=8.2.1=pyh9f0ad1d_0
  - certifi=2020.12.5=py37h89c1867_1
  - certipy=0.1.3=py_0
  - cf_xarray=0.4.0=pyh44b312d_0
  - cffi=1.14.5=py37hc58025e_0
  - cfgrib=0.9.8.5=pyhd8ed1ab_0
  - cfitsio=3.470=hb418390_7
  - cftime=1.4.1=py37h902c9e0_0
  - chardet=4.0.0=py37h89c1867_1
  - charls=2.2.0=h9c3ff4c_0
  - click=7.1.2=pyh9f0ad1d_0
  - click-plugins=1.1.1=py_0
  - cligj=0.7.1=pyhd8ed1ab_0
  - clisops=0.5.1=pyhd3deb0d_0
  - cloudpickle=1.6.0=py_0
  - colorama=0.4.4=pyh9f0ad1d_0
  - colorcet=2.0.6=pyhd8ed1ab_0
  - configurable-http-proxy=1.3.0=0
  - coverage=5.4=py37h5e8e339_0
  - cryptography=3.4.4=py37hf1a17b8_0
  - curl=7.71.1=he644dc0_8
  - cycler=0.10.0=py_2
  - cytoolz=0.11.0=py37h5e8e339_3
  - dash=1.19.0=pyhd8ed1ab_0
  - dash-core-components=1.15.0=pyhd8ed1ab_0
  - dash-html-components=1.1.2=pyh44b312d_0
  - dash-renderer=1.9.0=pyhd8ed1ab_0
  - dash-table=4.11.2=pyhd8ed1ab_0
  - dask=2021.2.0=pyhd8ed1ab_0
  - dask-core=2021.2.0=pyhd8ed1ab_0
  - datashader=0.12.0=pyhd3deb0d_0
  - datashape=0.5.4=py_1
  - dbus=1.13.6=hfdff14a_1
  - debugpy=1.2.1=py37hcd2ae1e_1
  - decorator=4.4.2=py_0
  - defusedxml=0.6.0=py_0
  - descartes=1.1.0=py_4
  - distarray=2.12.2=py_1
  - distributed=2021.2.0=py37h89c1867_0
  - docopt=0.6.2=py_1
  - dv3d=8.2.1=pyh9f0ad1d_0
  - eccodes=2.20.0=ha0e6eb6_0
  - entrypoints=0.3=pyhd8ed1ab_1003
  - esgf-compute-api=2.3.7=0_h1234567_
  - esmf=8.0.1=nompi_he31a43a_2
  - esmpy=8.0.1=nompi_py37h59b2dc9_2
  - expat=2.2.10=h9c3ff4c_0
  - ffmpeg=4.2.3=h167e202_0
  - fiona=1.8.18=py37h527b4ca_0
  - flask=1.1.2=pyh9f0ad1d_0
  - flask-compress=1.8.0=pyhd8ed1ab_0
  - fontconfig=2.13.1=hba837de_1004
  - freetype=2.10.4=h0708190_1
  - freexl=1.0.5=h516909a_1002
  - fsspec=0.8.5=pyhd8ed1ab_0
  - future=0.18.2=py37h89c1867_3
  - g2clib=1.6.0=hf3f1b0b_9
  - gdal=3.1.4=py37h2ec2946_5
  - genutil=8.2.1=py37h161383b_1
  - geojson=2.5.0=py_0
  - geopandas=0.8.2=pyhd8ed1ab_0
  - geos=3.9.0=h9c3ff4c_0
  - geotiff=1.6.0=h2b14fbe_4
  - geoviews=1.8.2=py_0
  - geoviews-core=1.8.2=py_0
  - gettext=0.19.8.1=h0b5b191_1005
  - ghostscript=9.53.3=h58526e2_2
  - giflib=5.2.1=h36c2ea0_2
  - gitdb=4.0.5=pyhd8ed1ab_1
  - gitpython=3.1.13=pyhd8ed1ab_0
  - glib=2.66.7=h9c3ff4c_0
  - glib-tools=2.66.7=h9c3ff4c_0
  - gmp=6.2.1=h58526e2_0
  - gnutls=3.6.13=h85f3911_1
  - gst-plugins-base=1.14.5=h0935bb2_2
  - gstreamer=1.18.3=h3560a44_0
  - h5netcdf=0.10.0=pyhd8ed1ab_0
  - h5py=3.1.0=nompi_py37h1e651dc_100
  - hdf4=4.2.13=h10796ff_1004
  - hdf5=1.10.6=nompi_h6a2412b_1114
  - heapdict=1.0.1=py_0
  - holoviews=1.14.1=pyhd3deb0d_0
  - hvplot=0.7.0=pyhd3deb0d_0
  - icu=68.1=h58526e2_0
  - idna=2.10=pyh9f0ad1d_0
  - imagecodecs=2021.1.11=py37h95c7a1b_1
  - imageio=2.9.0=py_0
  - importlib-metadata=3.4.0=py37h89c1867_0
  - importlib_metadata=3.4.0=hd8ed1ab_0
  - importlib_resources=5.1.0=py37h89c1867_0
  - iniconfig=1.1.1=pyh9f0ad1d_0
  - ipykernel=5.4.2=py37h888b3d9_0
  - ipyleaflet=0.13.6=pyhd8ed1ab_1
  - ipython=7.20.0=py37h888b3d9_2
  - ipython_genutils=0.2.0=py_1
  - ipywidgets=7.6.3=pyhd3deb0d_0
  - itsdangerous=1.1.0=py_0
  - jasper=1.900.1=h07fcdf6_1006
  - jedi=0.18.0=py37h89c1867_2
  - jinja2=2.11.3=pyh44b312d_0
  - joblib=1.0.1=pyhd8ed1ab_0
  - jpeg=9d=h36c2ea0_0
  - json-c=0.13.1=hbfbb72e_1002
  - json5=0.9.5=pyh9f0ad1d_0
  - jsonschema=3.2.0=py_2
  - jupyter=1.0.0=py37h89c1867_6
  - jupyter-archive=2.2.0=pyhd8ed1ab_0
  - jupyter-dash=0.4.0=pyhd8ed1ab_0
  - jupyter_bokeh=2.0.4=pyhd8ed1ab_0
  - jupyter_client=6.1.11=pyhd8ed1ab_1
  - jupyter_conda=4.1.0=hd8ed1ab_1
  - jupyter_console=6.2.0=py_0
  - jupyter_core=4.7.1=py37h89c1867_0
  - jupyter_server=1.3.0=py37h89c1867_0
  - jupyter_telemetry=0.1.0=pyhd8ed1ab_1
  - jupyterhub=1.3.0=py37h89c1867_0
  - jupyterhub-base=1.3.0=py37h89c1867_0
  - jupyterlab=2.2.9=pyhd8ed1ab_0
  - jupyterlab-git=0.23.3=pyhd8ed1ab_0
  - jupyterlab_pygments=0.1.2=pyh9f0ad1d_0
  - jupyterlab_server=1.2.0=py_0
  - jupyterlab_widgets=1.0.0=pyhd8ed1ab_1
  - jupytext=1.10.0=pyh44b312d_0
  - jxrlib=1.1=h7f98852_2
  - kealib=1.4.14=he4dc956_1
  - kiwisolver=1.3.1=py37h2527ec5_1
  - krb5=1.17.2=h926e7f8_0
  - lame=3.100=h7f98852_1001
  - lazy-object-proxy=1.5.2=py37h5e8e339_1
  - lcms2=2.12=hddcbb42_0
  - ld_impl_linux-64=2.35.1=hea4e1c9_2
  - lerc=2.2.1=h9c3ff4c_0
  - libaec=1.0.4=h9c3ff4c_1
  - libblas=3.8.0=17_openblas
  - libcblas=3.8.0=17_openblas
  - libcdms=3.1.2=h981a4fd_113
  - libcf=1.0.3=py37heda41dd_109
  - libclang=11.0.1=default_ha53f305_1
  - libcurl=7.71.1=hcdd3856_8
  - libdap4=3.20.6=hd7c4107_1
  - libdeflate=1.7=h7f98852_5
  - libdrs=3.1.2=h7918d09_113
  - libdrs_f=3.1.2=h5026c31_111
  - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=h516909a_1
  - libevent=2.1.10=hcdb4288_3
  - libffi=3.3=h58526e2_2
  - libgcc-ng=9.3.0=h2828fa1_18
  - libgdal=3.1.4=h0a4f56a_5
  - libgfortran-ng=9.3.0=hff62375_18
  - libgfortran5=9.3.0=hff62375_18
  - libglib=2.66.7=h1f3bc88_0
  - libgomp=9.3.0=h2828fa1_18
  - libiconv=1.16=h516909a_0
  - libidn2=2.3.0=h516909a_0
  - libkml=1.3.0=h02e6976_1012
  - liblapack=3.8.0=17_openblas
  - libllvm10=10.0.1=he513fc3_3
  - libllvm11=11.0.1=hf817b99_0
  - libnetcdf=4.7.4=nompi_h56d31a8_107
  - libnghttp2=1.43.0=h812cca2_0
  - libopenblas=0.3.10=pthreads_h4812303_5
  - libpng=1.6.37=h21135ba_2
  - libpq=12.3=h255efa7_3
  - libprotobuf=3.14.0=h780b84a_0
  - librttopo=1.1.0=hccdd1c9_5
  - libsodium=1.0.18=h36c2ea0_1
  - libspatialindex=1.9.3=h9c3ff4c_3
  - libspatialite=5.0.1=h04c9dda_2
  - libssh2=1.9.0=hab1572f_5
  - libstdcxx-ng=9.3.0=h6de172a_18
  - libtiff=4.2.0=hdc55705_0
  - libunistring=0.9.10=h14c3975_0
  - libuuid=2.32.1=h7f98852_1000
  - libuv=1.40.0=h7f98852_0
  - libwebp-base=1.2.0=h7f98852_0
  - libxcb=1.13=h7f98852_1003
  - libxkbcommon=1.0.3=he3ba5ed_0
  - libxml2=2.9.10=h72842e0_3
  - libxslt=1.1.33=h15afd5d_2
  - libzopfli=1.0.3=h9c3ff4c_0
  - llvmlite=0.35.0=py37h9d7f4d0_1
  - locket=0.2.0=py_2
  - lxml=4.6.2=py37h77fd288_1
  - lz4-c=1.9.3=h9c3ff4c_0
  - mako=1.1.4=pyh44b312d_0
  - mamba_gator=4.1.0=pyhd8ed1ab_1
  - markdown=3.3.3=pyh9f0ad1d_0
  - markdown-it-py=0.6.2=pyhd8ed1ab_0
  - markupsafe=1.1.1=py37h5e8e339_3
  - matplotlib=3.3.4=py37h89c1867_0
  - matplotlib-base=3.3.4=py37h0c9df89_0
  - mdit-py-plugins=0.2.5=pyhd8ed1ab_0
  - memory_profiler=0.58.0=py_0
  - mesalib=18.3.1=h590aaf7_0
  - mistune=0.8.4=py37h5e8e339_1003
  - more-itertools=8.7.0=pyhd8ed1ab_0
  - msgpack-python=1.0.2=py37h2527ec5_1
  - multipledispatch=0.6.0=py_0
  - munch=2.5.0=py_0
  - mysql-common=8.0.22=ha770c72_3
  - mysql-libs=8.0.22=h935591d_3
  - nbclient=0.5.2=pyhd8ed1ab_0
  - nbdime=2.1.0=py_0
  - nbformat=5.0.8=py_0
  - nbval=0.9.6=pyh9f0ad1d_0
  - nc-time-axis=1.2.0=py_1
  - ncurses=6.2=h58526e2_4
  - nest-asyncio=1.4.3=pyhd8ed1ab_0
  - netcdf-fortran=4.5.3=nompi_h1a0d97b_101
  - netcdf4=1.5.6=nompi_py37hdbee05a_100
  - nettle=3.6=he412f7d_0
  - networkx=2.5=py_0
  - nodejs=15.3.0=h92b4a50_1
  - notebook=6.2.0=py37h89c1867_0
  - nspr=4.29=h9c3ff4c_1
  - nss=3.61=hb5efdd6_0
  - numba=0.52.0=py37hdc94413_0
  - numpy=1.20.1=py37haa41c4c_0
  - oauthlib=3.0.1=py_0
  - olefile=0.46=pyh9f0ad1d_1
  - openblas=0.3.10=pthreads_h04b7a96_5
  - openh264=2.1.1=h780b84a_0
  - openjpeg=2.4.0=hf7af979_0
  - openssl=1.1.1i=h7f98852_0
  - owslib=0.23.0=pyhd8ed1ab_0
  - oyaml=1.0=pyhd8ed1ab_0
  - packaging=20.9=pyh44b312d_0
  - pamela=1.0.0=py_0
  - pandas=1.2.2=py37hdc94413_0
  - pandoc=2.11.4=h7f98852_0
  - pandocfilters=1.4.2=py_1
  - panel=0.10.3=pyhd8ed1ab_0
  - param=1.10.1=pyhd3deb0d_0
  - parso=0.8.1=pyhd8ed1ab_0
  - partd=1.1.0=py_0
  - patsy=0.5.1=py_0
  - pcre=8.44=he1b5a44_0
  - pexpect=4.8.0=pyh9f0ad1d_2
  - pickleshare=0.7.5=py_1003
  - pillow=8.1.0=py37h4600e1f_2
  - pint=0.16.1=py_0
  - pip=21.0.1=pyhd8ed1ab_0
  - pixman=0.40.0=h36c2ea0_0
  - plotly=4.14.3=pyh44b312d_0
  - pluggy=0.13.1=py37h89c1867_4
  - pooch=1.3.0=pyhd8ed1ab_0
  - poppler=0.89.0=h2de54a5_5
  - poppler-data=0.4.10=0
  - postgresql=12.3=hc2f5b80_3
  - proj=7.2.0=h277dcde_2
  - prometheus_client=0.9.0=pyhd3deb0d_0
  - prompt-toolkit=3.0.16=pyha770c72_0
  - prompt_toolkit=3.0.16=hd8ed1ab_0
  - protobuf=3.14.0=py37hcd2ae1e_1
  - pscript=0.7.5=pyhd3deb0d_0
  - psutil=5.8.0=py37h5e8e339_1
  - pthread-stubs=0.4=h36c2ea0_1001
  - ptyprocess=0.7.0=pyhd3deb0d_0
  - py=1.10.0=pyhd3deb0d_0
  - pycparser=2.20=pyh9f0ad1d_2
  - pyct=0.4.6=py_0
  - pyct-core=0.4.6=py_0
  - pycurl=7.43.0.6=py37h88a64d2_1
  - pydap=3.2.2=pyh9f0ad1d_1001
  - pygments=2.8.0=pyhd8ed1ab_0
  - pyjwt=2.0.1=pyhd8ed1ab_0
  - pyopenssl=20.0.1=pyhd8ed1ab_0
  - pyparsing=2.4.7=pyh9f0ad1d_0
  - pyproj=3.0.0.post1=py37hf874b97_0
  - pyqt=5.12.3=py37h89c1867_7
  - pyqt-impl=5.12.3=py37he336c9b_7
  - pyqt5-sip=4.19.18=py37hcd2ae1e_7
  - pyqtchart=5.12=py37he336c9b_7
  - pyqtwebengine=5.12.1=py37he336c9b_7
  - pyrsistent=0.17.3=py37h5e8e339_2
  - pyshp=2.1.3=pyh44b312d_0
  - pysocks=1.7.1=py37h89c1867_3
  - pytest=6.2.2=py37h89c1867_0
  - python=3.7.9=hffdb5ce_100_cpython
  - python-dateutil=2.8.1=py_0
  - python-editor=1.0.4=py_0
  - python-json-logger=2.0.1=pyh9f0ad1d_0
  - python_abi=3.7=1_cp37m
  - pytz=2021.1=pyhd8ed1ab_0
  - pyviz_comms=2.0.1=pyhd3deb0d_0
  - pywavelets=1.1.1=py37h902c9e0_3
  - pyyaml=5.4.1=py37h5e8e339_0
  - pyzmq=22.0.3=py37h499b945_0
  - qt=5.12.9=h9d6b050_2
  - qtconsole=5.0.2=pyhd8ed1ab_0
  - qtpy=1.9.0=py_0
  - rasterio=1.2.0=py37ha549118_0
  - readline=8.0=he28a2e2_2
  - regionmask=0.6.2=pyhd8ed1ab_0
  - requests=2.25.1=pyhd3deb0d_0
  - retrying=1.3.3=py_2
  - rioxarray=0.2.0=pyhd8ed1ab_0
  - roocs-utils=0.1.5=pyhd3deb0d_1
  - rtree=0.9.7=py37h0b55af0_1
  - ruamel.yaml=0.16.12=py37h5e8e339_2
  - ruamel.yaml.clib=0.2.2=py37h5e8e339_2
  - scikit-image=0.18.1=py37hdc94413_0
  - scikit-learn=0.24.1=py37h69acf81_0
  - scipy=1.6.0=py37h14a347d_0
  - send2trash=1.5.0=py_0
  - setuptools=49.6.0=py37h89c1867_3
  - shapely=1.7.1=py37h4c50fd9_2
  - siphon=0.8.0=py37h89c1867_1004
  - six=1.15.0=pyh9f0ad1d_0
  - smmap=3.0.5=pyh44b312d_0
  - snappy=1.1.8=he1b5a44_3
  - sniffio=1.2.0=py37h89c1867_1
  - snuggs=1.4.7=py_0
  - sortedcontainers=2.3.0=pyhd8ed1ab_0
  - soupsieve=2.0.1=py_1
  - sqlalchemy=1.3.23=py37h5e8e339_0
  - sqlite=3.34.0=h74cdb3f_0
  - statsmodels=0.12.2=py37h902c9e0_0
  - tblib=1.6.0=py_0
  - terminado=0.9.2=py37h89c1867_0
  - testpath=0.4.4=py_0
  - threadpoolctl=2.1.0=pyh5ca1d4c_0
  - threddsclient=0.4.2=py_0
  - tifffile=2021.2.1=pyhd8ed1ab_0
  - tiledb=2.2.3=h91fcb0e_0
  - tk=8.6.10=h21135ba_1
  - toml=0.10.2=pyhd8ed1ab_0
  - toolz=0.11.1=py_0
  - tornado=6.1=py37h5e8e339_1
  - tqdm=4.56.2=pyhd8ed1ab_0
  - traitlets=5.0.5=py_0
  - traittypes=0.2.1=pyh9f0ad1d_2
  - typing_extensions=3.7.4.3=py_0
  - tzcode=2021a=h7f98852_0
  - udunits2=2.2.27.27=h360fe7b_0
  - urllib3=1.26.3=pyhd8ed1ab_0
  - vcs=8.2.1=pyh9f0ad1d_0
  - voila=0.2.6=pyhd8ed1ab_0
  - vtk-cdat=8.2.0.8.2=py37_mesalibhead77ed_0
  - wcwidth=0.2.5=pyh9f0ad1d_2
  - webencodings=0.5.1=py_1
  - webob=1.8.6=py_0
  - werkzeug=1.0.1=pyh9f0ad1d_0
  - wget=1.20.1=h22169c7_0
  - wheel=0.36.2=pyhd3deb0d_0
  - widgetsnbextension=3.5.1=py37h89c1867_4
  - x264=1!152.20180806=h14c3975_0
  - xarray=0.16.2=pyhd8ed1ab_0
  - xclim=0.23.0=pyhd8ed1ab_0
  - xerces-c=3.2.3=h9d8b166_2
  - xesmf=0.5.2=pyhd8ed1ab_0
  - xeus=1.0.1=h78d96c3_0
  - xeus-python=0.11.0=py37h52ea871_0
  - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.0.10=h516909a_0
  - xorg-libsm=1.2.3=h84519dc_1000
  - xorg-libx11=1.6.12=h516909a_0
  - xorg-libxau=1.0.9=h7f98852_0
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h516909a_0
  - xorg-libxrender=0.9.10=h516909a_1002
  - xorg-renderproto=0.11.1=h14c3975_1002
  - xorg-xextproto=7.3.0=h7f98852_1002
  - xorg-xproto=7.0.31=h7f98852_1007
  - xz=5.2.5=h516909a_1
  - yaml=0.2.5=h516909a_0
  - zeromq=4.3.4=h9c3ff4c_0
  - zfp=0.5.5=h9c3ff4c_4
  - zict=2.0.0=py_0
  - zipp=3.4.0=py_0
  - zlib=1.2.11=h516909a_1010
  - zstd=1.4.8=ha95c52a_1
  - pip:
    - astunparse==1.6.3
    - birdhouse-birdy==0.7.0
    - cdms2==3.1.5
    - colour==0.1.5
    - funcsigs==1.0.2
    - handcalcs==1.3.0
    - innerscope==0.2.0
    - ipython-blocking==0.2.1
    - jupyternotify==0.1.15
    - nbconvert==5.6.1
    - nbresuse==0.4.0
    - pixiedust==1.1.19
    - pytest-tornasync==0.6.0.post2
    - ravenpy==0.2.3
    - regrid2==3.1.5
    - requests-magpie==0.1.1
    - wrapt==1.12.1
prefix: /opt/conda/envs/birdy
```
Zeitsperre pushed a commit that referenced this pull request Aug 17, 2023
@tlvu
Merge pull request #349 from Ouranosinc/pin-owslib
503eaf4 
pin owslib to 0.21 to avoid timeout bug in 0.22

OWSLib timeout bug geopython/OWSLib#737

All the `AttributeError: 'WebCoverageService_2_0_1' object has no attribute 'timeout'` errors are gone.

`make test-notebooks` failures goes down from 36 failures to 20.

```
============================================================== short test summary info ==============================================================$
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 8                                                                               
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 9                                                                               
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 10                                                                              
FAILED docs/source/notebooks/Bias_correcting_climate_data.ipynb::Cell 11                                                                              
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 13                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 17                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 18                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 19                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 20                                                                                    
FAILED docs/source/notebooks/Full_process_example_1.ipynb::Cell 21                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 3                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 4                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 5                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 6                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 7                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 8                                                                                    
FAILED docs/source/notebooks/Perform_Regionalization.ipynb::Cell 9                                                                                    
FAILED docs/source/notebooks/Region_selection.ipynb::Cell 7                                                                                           
FAILED docs/source/notebooks/Region_selection.ipynb::Cell 8                                                                                           
FAILED docs/source/notebooks/Subset_climate_data_over_watershed.ipynb::Cell 5                                                                         
========================================= 20 failed, 144 passed, 2 skipped, 1 warning in 2807.05s (0:46:47) =========================================$
Makefile:195: recipe for target 'test-notebooks' failed
```
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@tlvu tlvu tlvu approved these changes

@cjauvin cjauvin Awaiting requested review from cjauvin

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@huard @tlvu