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Issues: PGScatalog/pgsc_calc
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MATCH_VARIANTS always fails on 'Converting VariantFrame to feather format'
bug
Something isn't working
#329
opened Jul 1, 2024 by
csjohnson23
ValueError: could not broadcast input array from shape (3065,) into shape (2777,)
bug
Something isn't working
#325
opened Jun 24, 2024 by
cwarlysolsberg
ERROR ~ No signature of method: java.lang.Boolean.getFileSystem() is applicable for argument types: () values: [] when using --run_ancestry
user-query
User queries & requests
#324
opened Jun 19, 2024 by
Carldeboer
Scoring for non-additive models that aren't dominant/recessive
enhancement
New feature or request
#314
opened Jun 14, 2024 by
smlmbrt
ToDo: test case with single sample
enhancement
New feature or request
#287
opened Apr 25, 2024 by
smlmbrt
Ensure pgsc_calc works with FID & IID columns
bug
Something isn't working
enhancement
New feature or request
Improve gnomAD reference panel (HGDP+1kG)
documentation
Improvements or additions to documentation
enhancement
New feature or request
#183
opened Sep 28, 2023 by
smlmbrt
2 of 4 tasks
Reference creation: current docs/code doesn't support other data
bug
Something isn't working
documentation
Improvements or additions to documentation
Improvements to PCA steps & default reference panel
enhancement
New feature or request
#133
opened Jul 31, 2023 by
smlmbrt
1 of 3 tasks
Allow combined scorefiles as input
documentation
Improvements or additions to documentation
enhancement
New feature or request
Enhance Sample and Variant-level QC
enhancement
New feature or request
#21
opened Mar 21, 2022 by
smlmbrt
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