Removed steady state check in _run_transient of TransientReactiveTransport

[mkaguer]

Fixes #1796

[codecov]

Codecov Report

Merging #1851 (92c24b8) into dev (e1d10b6) will decrease coverage by 0.0%.
The diff coverage is 100.0%.

@@           Coverage Diff           @@
##             dev   #1851     +/-   ##
=======================================
- Coverage   87.1%   87.1%   -0.1%     
=======================================
  Files        147     147             
  Lines      12644   12635      -9     
=======================================
- Hits       11020   11011      -9     
  Misses      1624    1624             

[mkaguer]

@ma-sadeghi could you check my changes?

Here is some code below I was using to test out my changes. For some reason, the logger.info command wasn't printing anything in the command window. I merged dev and still didn't work. Does this happen to you?

import openpnm as op

# network, geometry, phase
net = op.network.Cubic(shape = [10, 10, 10], spacing=1e-4)
geo = op.geometry.StickAndBall(network=net, pores=net.Ps, throats=net.Ts)
phase = op.phases.Air(network=net)

# physics
phys = op.physics.Standard(network=net, phase=phase, geometry=geo)


# add a source term
phase['pore.concentration'] = 0
phys['pore.A1'] = -1e-11
phys['pore.A2'] = 1
phys['pore.A3'] = 0
phys.add_model(propname='pore.rxn',
               model=op.models.physics.generic_source_term.power_law,
               X='pore.concentration',
               A1='pore.A1',
               A2='pore.A2',
               A3='pore.A3')

# algorithm
tfd = op.algorithms.TransientFickianDiffusion(network=net, phase=phase)

tfd.set_source(propname='pore.rxn', pores=[25, 50, 75])
tfd.set_IC(values=0)
tfd.set_value_BC(pores=net.pores(labels='front'), values=100)

tfd.settings['t_intial'] = 0
tfd.settings['t_final'] = 10
tfd.settings['t_step'] = 0.1
tfd.settings['t_output'] = 1

tfd.run()

[ma-sadeghi]

@mkaguer Good job. Looks good to me. Regarding the logger message, it might be due to the logger level. Try:

import openpnm as op
ws = op.Workspace()
ws.settings["loglevel"] = 20

See here for more info on log level.