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clsOboEntry.cs
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clsOboEntry.cs
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using System.Collections.Generic;
namespace OBODataConverter
{
public class OboEntry
{
public enum ParentTypes
{
Unknown = 0,
IsA = 1,
HasDomain = 2,
HasOrder = 3,
HasRegExp = 4,
HasUnits = 5,
PartOf = 6
}
public struct ParentTypeInfo
{
public ParentTypes ParentType;
public string ParentTermName;
public override string ToString()
{
return ParentType + ": " + ParentTermName;
}
}
public string Identifier { get; }
public string Name { get; set; }
public string Definition { get; set; }
public string Comment { get; set; }
/// <summary>
/// Parent term identifiers
/// </summary>
/// <remarks>
/// Keys are parent term ids and values are parent term names
/// </remarks>
public Dictionary<string, ParentTypeInfo> ParentTerms { get; }
public bool IsLeaf { get; set; }
public bool IsObsolete { get; set; }
/// <summary>
/// Constructor
/// </summary>
/// <param name="identifier"></param>
/// <param name="name"></param>
/// <param name="isLeaf"></param>
public OboEntry(string identifier, string name, bool isLeaf = false)
{
Identifier = identifier;
Name = name;
Definition = string.Empty;
Comment = string.Empty;
IsLeaf = isLeaf;
ParentTerms = new Dictionary<string, ParentTypeInfo>();
}
public void AddParentTerm(string parentTermID, ParentTypeInfo parentTermInfo)
{
if (ParentTerms.ContainsKey(parentTermID))
{
// Parent term already defined
return;
}
ParentTerms.Add(parentTermID, parentTermInfo);
}
public override string ToString()
{
return Identifier + ": " + Name;
}
}
}