Computational Mass Spectrometry @ Pacific Northwest National Laboratory
- 43 followers
- Richland, WA
- https://omics.pnl.gov/software/
Popular repositories
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Thermo-Raw-File-Reader Public
.NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
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Informed-Proteomics Public
Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
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DeconTools Public
Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.
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The Molecular Weight Calculator can be used to calculate the molecular weight and percent composition of chemical formulas and amino acids (peptides). It includes several other utility modules and …
Repositories
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- PRISM-Class-Library Public
The PRISM Class Library is a collection of routines used by many of the software tools that support the Data Management System at PNNL.
- PNNL-Comp-Mass-Spec.github.io Public
Markdown files displayed at https://pnnl-comp-mass-spec.github.io/
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- UIMF-Library Public
Used to create, modify and extract data from UIMF files, which are SQLite databases of mass spectrometry data acquired at Pacific Northwest National Laboratory (PNNL)
- SAIS-CSharp Public
Suffix array, induced sorting library. Source from https://sites.google.com/site/yuta256/sais, with updated project and framework configuration
- Protein-File-Reader Public
Class for reading Protein files, specifically .fasta files and certain tab-delimited formats
