Merge pull request #4740 from wanghaoshuang/seq_expand_op

Seq expand op

paddle/operators/seq_expand_op.cc

@@ -0,0 +1,153 @@
+/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
+
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
+
+   http://www.apache.org/licenses/LICENSE-2.0
+
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License. */
+
+#include "paddle/operators/seq_expand_op.h"
+
+namespace paddle {
+namespace operators {
+
+using framework::Tensor;
+
+class SeqExpandOp : public framework::OperatorWithKernel {
+ public:
+  using framework::OperatorWithKernel::OperatorWithKernel;
+
+ protected:
+  void InferShape(framework::InferShapeContext* ctx) const override {
+    PADDLE_ENFORCE(ctx->HasInput("X"));
+    PADDLE_ENFORCE(ctx->HasOutput("Out"));
+    PADDLE_ENFORCE(ctx->HasInput("Y"));
+    framework::DDim out_dim;
+    out_dim = ctx->GetInputDim("Y");
+    ctx->ShareLoD("Y", "Out");
+    ctx->SetOutputDim("Out", out_dim);
+  }
+};
+
+class SeqExpandOpMaker : public framework::OpProtoAndCheckerMaker {
+ public:
+  SeqExpandOpMaker(framework::OpProto* proto,
+                   framework::OpAttrChecker* op_checker)
+      : OpProtoAndCheckerMaker(proto, op_checker) {
+    AddInput("X",
+             "(Tensor or LoDTensor) The input(X) of this operator can be a "
+             "LoDTensor or a base Tensor.");
+    AddInput("Y",
+             "(LoDTensor)The reference input(Y) of seq_expand op."
+             "It must be a LoDTensor with k-level(k>0)."
+             "The input(X) will be expanded according to LOD of input(Y)."
+             "The element numbers of last level in input(Y) "
+             "must be equal to dims[0] of input(X).");
+    AddOutput("Out",
+              "(LodTensor)The output of seq_expand op."
+              "The lod of output will be as same as input(Y)'s lod.");
+    AddComment(R"DOC(
+Expand input(X) according to LOD of input(Y).
+
+Case 1:
+
+Given 2-level a LoDTensor input(X)
+    X.lod = [[0,       2, 3],
+             [0, 1,    3, 4]]
+    X.data = [a, b, c, d]
+    X.dims = [4, 1]
+and input(Y)
+    Y.lod = [[0,    2,    4],
+             [0, 3, 6, 7, 8]]
+with condition len(Y.lod[-1]) -1 == X.dims[0]
+then we get 2-level LoDTensor
+    Out.lod = [[0,                2,    4],
+               [0,       3,       6, 7, 8]]
+    Out.data = [a, a, a, b, b, b, c, d]
+    Out.dims = [8, 1]
+
+Case 2:
+
+Given a 0-level LoDTensor input(X)
+    X.data = [a, b, c]
+    X.lod = NULL
+    X.dims = [3, 1]
+and input(Y)
+    Y.lod = [[0, 2, 3, 6]]
+with condition len(Y.lod[-1]) -1 == X.dims[0]
+then we get 1-level LoDTensor
+    Out.lod = [[0,    2, 3,      6]]
+    Out.data = [a, a, b, c, c, c]
+    Out.dims = [6, 1]
+
+Case 3:
+
+Given a 0-level LoDTensor input(X)
+    X.data = [[a, b], [c, d], [e, f]]
+    X.lod = NULL
+    X.dims = [3, 2]
+and input(Y)
+    Y.lod = [[0, 2, 3, 6]]
+with condition len(Y.lod[-1]) -1 == X.dims[0]
+then we get 1-level LoDTensor
+    Out.lod = [[0,           2,     3,                     6]]
+    Out.data = [[a,b], [a,b] [c,d], [e, f], [e, f], [e, f]]
+    Out.dims = [6, 2]
+
+Case 4:
+
+Given 2-level a LoDTensor input(X)
+    X.lod = [[0,       2, 3],
+             [0, 1,    3, 4]]
+    X.data = [a, b, c, d]
+    X.dims = [4, 1]
+and input(Y)
+    Y.lod = [[0,    2,    4],
+             [0, 3, 6, 6, 8]]
+with condition len(Y.lod[-1]) -1 == X.dims[0]
+then we get 2-level LoDTensor
+    Out.lod = [[0,                2,    4],
+               [0,       3,       6, 6, 8]]
+    Out.data = [a, a, a, b, b, b, d, d]
+    Out.dims = [8, 1]
+
+
+)DOC");
+  }
+};
+
+class SeqExpandOpGrad : public framework::OperatorWithKernel {
+ public:
+  using framework::OperatorWithKernel::OperatorWithKernel;
+
+ protected:
+  void InferShape(framework::InferShapeContext* ctx) const override {
+    PADDLE_ENFORCE(ctx->HasInput("X"));
+    PADDLE_ENFORCE(ctx->HasInput("Out"));
+    PADDLE_ENFORCE(ctx->HasInput(framework::GradVarName("Out")),
+                   "The input(Out@GRAD) should not be null");
+    auto x_dims = ctx->GetInputDim("X");
+    auto x_grad_name = framework::GradVarName("X");
+    if (ctx->HasOutput(x_grad_name)) {
+      ctx->SetOutputDim(x_grad_name, x_dims);
+    }
+  }
+};
+
+}  // namespace operators
+}  // namespace paddle
+
+namespace ops = paddle::operators;
+REGISTER_OP(seq_expand, ops::SeqExpandOp, ops::SeqExpandOpMaker,
+            seq_expand_grad, ops::SeqExpandOpGrad);
+REGISTER_OP_CPU_KERNEL(seq_expand,
+                       ops::SeqExpandKernel<paddle::platform::CPUPlace, float>);
+REGISTER_OP_CPU_KERNEL(
+    seq_expand_grad,
+    ops::SeqExpandGradKernel<paddle::platform::CPUPlace, float>);

paddle/operators/seq_expand_op.cu

@@ -0,0 +1,23 @@
+/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
+
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
+
+   http://www.apache.org/licenses/LICENSE-2.0
+
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License. */
+
+#define EIGEN_USE_GPU
+#include "paddle/operators/seq_expand_op.h"
+
+namespace ops = paddle::operators;
+REGISTER_OP_GPU_KERNEL(seq_expand,
+                       ops::SeqExpandKernel<paddle::platform::GPUPlace, float>);
+REGISTER_OP_GPU_KERNEL(
+    seq_expand_grad,
+    ops::SeqExpandGradKernel<paddle::platform::GPUPlace, float>);

paddle/operators/seq_expand_op.h

@@ -0,0 +1,100 @@
+/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
+
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
+
+   http://www.apache.org/licenses/LICENSE-2.0
+
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License. */
+
+#pragma once
+
+#include "paddle/framework/op_registry.h"
+#include "paddle/memory/memcpy.h"
+#include "unsupported/Eigen/CXX11/Tensor"
+
+namespace paddle {
+namespace operators {
+
+using LoDTensor = framework::LoDTensor;
+
+template <typename Place, typename T>
+class SeqExpandKernel : public framework::OpKernel<T> {
+ public:
+  void Compute(const framework::ExecutionContext& context) const override {
+    auto* x = context.Input<LoDTensor>("X");
+    auto* out = context.Output<LoDTensor>("Out");
+    const T* x_data = x->data<T>();
+    auto x_dims = x->dims();
+    auto* y = context.Input<LoDTensor>("Y");
+    PADDLE_ENFORCE_EQ(x_dims[0], y->lod().back().size() - 1,
+                      "The size of last lod level in Input(Y)"
+                      "must be equal to dims[0] of Input(X).");
+    out->set_lod(y->lod());
+    auto place = context.GetEigenDevice<Place>();
+    size_t element_len = framework::product(x_dims) / x_dims[0];
+    T* out_data = out->mutable_data<T>(context.GetPlace());
+    auto out_starts = out->lod().back();
+
+    for (size_t i = 0; i < out_starts.size() - 1; i++) {
+      int scale = out_starts[i + 1] - out_starts[i];
+      Eigen::TensorMap<
+          Eigen::Tensor<const T, 2, Eigen::RowMajor, Eigen::DenseIndex>>
+          x_t(x_data, 1, element_len);
+      Eigen::TensorMap<Eigen::Tensor<T, 2, Eigen::RowMajor, Eigen::DenseIndex>>
+          out_t(out_data, scale, element_len);
+      Eigen::array<int, 2> cast({scale, 1});
+      out_t.device(place) = x_t.broadcast(cast);
+      x_data += element_len;
+      out_data += element_len * scale;
+    }
+  }
+};
+
+/*
+ *Given Grad(Out)
+ *
+ *    Grad(Out).lod = [[0,                            2],
+ *                     [0,              3,            6]]
+ *    Grad(Out).data = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6]
+ * Then
+ *    Grad(X).data = [(0.1 + 0.2 + 0.3), (0.4 + 0.5 + 0.6)]
+ *                 = [0.6, 1.5]
+ *    Grad(X).lod = Input(X).lod
+ *
+ * */
+template <typename Place, typename T>
+class SeqExpandGradKernel : public framework::OpKernel<T> {
+ public:
+  void Compute(const framework::ExecutionContext& context) const override {
+    auto* d_out = context.Input<LoDTensor>(framework::GradVarName("Out"));
+    auto* x = context.Input<LoDTensor>("X");
+    auto* out = context.Input<LoDTensor>("Out");
+    auto* d_x = context.Output<LoDTensor>(framework::GradVarName("X"));
+    auto out_last_level = out->lod().back();
+    d_x->set_lod(x->lod());
+    const T* d_out_data = d_out->data<T>();
+    T* d_x_data = d_x->mutable_data<T>(context.GetPlace());
+    size_t element_len = d_out->numel() / d_out->dims()[0];
+    for (size_t i = 0; i < out_last_level.size() - 1; ++i) {
+      size_t repeat = out_last_level[i + 1] - out_last_level[i];
+      Eigen::TensorMap<
+          Eigen::Tensor<const T, 2, Eigen::RowMajor, Eigen::DenseIndex>>
+      d_out_t(d_out_data, static_cast<int>(repeat), element_len);
+      Eigen::TensorMap<Eigen::Tensor<T, 1, Eigen::RowMajor, Eigen::DenseIndex>>
+      d_x_t(d_x_data, static_cast<int>(element_len));
+      auto place = context.GetEigenDevice<Place>();
+      d_x_t.device(place) = d_out_t.sum(Eigen::array<int, 1>({{0}}));
+      d_out_data += (repeat * element_len);
+      d_x_data += element_len;
+    }
+  }
+};
+
+}  // namespace operators
+}  // namespace paddle

paddle/operators/sequence_concat_op.cc

@@ -68,20 +68,20 @@ class SequenceConcatOpMaker : public framework::OpProtoAndCheckerMaker {
                  "The level should be less than the level number of inputs.")
         .SetDefault(0);
     AddComment(R"DOC(
-    The sequence_concat operator concatenates multiple LoDTensors. 
-    It only supports sequence (LoD Tensor with level number is 1) 
+    The sequence_concat operator concatenates multiple LoDTensors.
+    It only supports sequence (LoD Tensor with level number is 1)
     or a nested sequence (LoD tensor with level number is 2) as its input.
     - Case1:
       If the axis is other than 0(here, axis is 1 and level is 1),
-      each input should have the same LoD information and the LoD 
+      each input should have the same LoD information and the LoD
       information of the output keeps the same as the input.
 
       LoD(x0) = {{0,2,4}, {0,1,2,3,4}}; Dims(x0) = (4,3,4)
       LoD(x1) = {{0,2,4}, {0,1,2,3,4}}; Dims(x1) = (4,4,4)
       LoD(Out) = {{0,2,4}, {0,1,2,3,4}}; Dims(Out) = (4,7,4)
 
     - Case2:
-      If the axis is 0(here, leve is 0), the inputs are concatenated along 
+      If the axis is 0(here, leve is 0), the inputs are concatenated along
       time steps, the LoD information of the output need to re-compute.
 
       LoD(x0) = {{0,2,4}, {0,1,2,3,4}}; Dims(x0) = (4,3,4)
@@ -94,7 +94,7 @@ class SequenceConcatOpMaker : public framework::OpProtoAndCheckerMaker {
       LoD(x0) = {{0,2,4}, {0,1,2,3,4}}; Dims(x0) = (4,3,4)
       LoD(x1) = {{0,3,5}, {0,1,3,4,5}}; Dims(x1) = (5,3,4)
       LoD(Out) = {{0,5,9}, {0,2,5,7,9}}; Dims(Out) = (9,3,4)
-      
+
     NOTE: The levels of all the inputs should be the same.
     )DOC");
   }

python/paddle/v2/framework/tests/test_seq_expand.py

@@ -0,0 +1,63 @@
+import unittest
+import numpy as np
+from op_test import OpTest
+
+
+class TestSeqExpand(OpTest):
+    def set_data(self):
+        x_data = np.random.uniform(0.1, 1, [3, 1]).astype('float32')
+        y_data = np.random.uniform(0.1, 1, [8, 1]).astype('float32')
+        y_lod = [[0, 1, 4, 8]]
+        self.inputs = {'X': x_data, 'Y': (y_data, y_lod)}
+
+    def compute(self):
+        x = self.inputs['X']
+        x_data, x_lod = x if type(x) == tuple else (x, None)
+        n = 1 + x_data.shape[0] if not x_lod else len(x_lod[0])
+        y_data, y_lod = self.inputs['Y']
+        repeats = [((y_lod[-1][i + 1] - y_lod[-1][i]))
+                   for i in range(len(y_lod[-1]) - 1)]
+        out = x_data.repeat(repeats, axis=0)
+        self.outputs = {'Out': out}
+
+    def setUp(self):
+        self.op_type = 'seq_expand'
+        self.set_data()
+        self.compute()
+
+    def test_check_output(self):
+        self.check_output()
+
+    def test_check_grad(self):
+        self.check_grad(["X"], "Out")
+
+
+class TestSeqExpandCase1(TestSeqExpand):
+    def set_data(self):
+        x_data = np.random.uniform(0.1, 1, [5, 1]).astype('float32')
+        x_lod = [[0, 2, 5]]
+        y_data = np.random.uniform(0.1, 1, [13, 1]).astype('float32')
+        y_lod = [[0, 2, 5], [0, 2, 4, 7, 10, 13]]
+        self.inputs = {'X': (x_data, x_lod), 'Y': (y_data, y_lod)}
+
+
+class TestSeqExpandCase2(TestSeqExpand):
+    def set_data(self):
+        x_data = np.random.uniform(0.1, 1, [1, 2, 2]).astype('float32')
+        x_lod = [[0, 1]]
+        y_data = np.random.uniform(0.1, 1, [2, 2, 2]).astype('float32')
+        y_lod = [[0, 2]]
+        self.inputs = {'X': (x_data, x_lod), 'Y': (y_data, y_lod)}
+
+
+class TestSeqExpandCase3(TestSeqExpand):
+    def set_data(self):
+        x_data = np.random.uniform(0.1, 1, [4, 1]).astype('float32')
+        x_lod = [[0, 1, 2, 3, 4]]
+        y_data = np.random.uniform(0.1, 1, [6, 1]).astype('float32')
+        y_lod = [[0, 2, 4, 4, 6]]
+        self.inputs = {'X': (x_data, x_lod), 'Y': (y_data, y_lod)}
+
+
+if __name__ == '__main__':
+    unittest.main()