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Updated production_structure.sql file.
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@gsrohde
gsrohde committed Jan 6, 2015
1 parent 29b1ee5 commit 1d60225
Showing 1 changed file with 166 additions and 5 deletions.
171 changes: 166 additions & 5 deletions db/production_structure.sql
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Expand Up @@ -11,6 +11,50 @@ SET client_min_messages = warning;

SET search_path = public, pg_catalog;

--
-- Name: no_cultivar_member(bigint); Type: FUNCTION; Schema: public; Owner: -
--

CREATE FUNCTION no_cultivar_member(this_pft_id bigint) RETURNS boolean
LANGUAGE plpgsql
AS $$
DECLARE cultivar_member_exists boolean;
BEGIN
SELECT EXISTS(SELECT 1 FROM cultivars_pfts WHERE pft_id = this_pft_id) INTO cultivar_member_exists;
RETURN NOT cultivar_member_exists;
END
$$;


--
-- Name: FUNCTION no_cultivar_member(this_pft_id bigint); Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON FUNCTION no_cultivar_member(this_pft_id bigint) IS 'Returns TRUE if the pft with id "this_pft_id" contains no members which are cultivars (as opposed to species).';


--
-- Name: no_species_member(bigint); Type: FUNCTION; Schema: public; Owner: -
--

CREATE FUNCTION no_species_member(this_pft_id bigint) RETURNS boolean
LANGUAGE plpgsql
AS $$
DECLARE species_member_exists boolean;
BEGIN
SELECT EXISTS(SELECT 1 FROM pfts_species WHERE pft_id = this_pft_id) INTO species_member_exists;
RETURN NOT species_member_exists;
END
$$;


--
-- Name: FUNCTION no_species_member(this_pft_id bigint); Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON FUNCTION no_species_member(this_pft_id bigint) IS 'Returns TRUE if the pft with id "this_pft_id" contains no members which are species (as opposed to cultivars).';


--
-- Name: prevent_conflicting_range_changes(); Type: FUNCTION; Schema: public; Owner: -
--
Expand Down Expand Up @@ -384,6 +428,33 @@ COMMENT ON COLUMN cultivars.name IS 'Cultivar name given by breeder or reported
COMMENT ON COLUMN cultivars.ecotype IS 'Does not apply for all species, used in the case of switchgrass to differentiate lowland and upland genotypes.';


--
-- Name: cultivars_pfts; Type: TABLE; Schema: public; Owner: -; Tablespace:
--

CREATE TABLE cultivars_pfts (
pft_id bigint NOT NULL,
cultivar_id bigint NOT NULL,
created_at timestamp without time zone,
updated_at timestamp without time zone,
CONSTRAINT no_conflicting_member CHECK (no_species_member(pft_id))
);


--
-- Name: TABLE cultivars_pfts; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON TABLE cultivars_pfts IS 'This table tells which cultivars are members of which pfts. For each row, the cultivar with id "cultivar_id" is a member of the pft with id "pft_id".';


--
-- Name: CONSTRAINT no_conflicting_member ON cultivars_pfts; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON CONSTRAINT no_conflicting_member ON cultivars_pfts IS 'Ensure the pft_id does not refer to a pft having one or more species as members; pfts referred to by this table can only contain other cultivars.';


--
-- Name: current_posteriors; Type: TABLE; Schema: public; Owner: -; Tablespace:
--
Expand Down Expand Up @@ -938,7 +1009,7 @@ CREATE TABLE pfts (
definition text,
created_at timestamp(6) without time zone,
updated_at timestamp(6) without time zone,
name character varying(255),
name character varying(255) NOT NULL,
parent_id bigint,
pft_type character varying(255) DEFAULT 'plant'::character varying,
modeltype_id bigint NOT NULL
Expand All @@ -956,7 +1027,7 @@ COMMENT ON COLUMN pfts.definition IS 'Defines the creator and context under whic
-- Name: COLUMN pfts.name; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON COLUMN pfts.name IS 'unique identifier used by PEcAn.';
COMMENT ON COLUMN pfts.name IS 'pft names are unique within a given model type.';


--
Expand All @@ -976,13 +1047,28 @@ CREATE TABLE pfts_priors (
--

CREATE TABLE pfts_species (
pft_id bigint,
specie_id bigint,
pft_id bigint NOT NULL,
specie_id bigint NOT NULL,
created_at timestamp(6) without time zone,
updated_at timestamp(6) without time zone
updated_at timestamp(6) without time zone,
CONSTRAINT no_conflicting_member CHECK (no_cultivar_member(pft_id))
);


--
-- Name: TABLE pfts_species; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON TABLE pfts_species IS 'This table tells which species are members of which pfts. For each row, the species with id "specie_id" is a member of the pft with id "pft_id".';


--
-- Name: CONSTRAINT no_conflicting_member ON pfts_species; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON CONSTRAINT no_conflicting_member ON pfts_species IS 'Ensure the pft_id does not refer to a pft having one or more cultivars as members; pfts referred to by this table con only contain other species.';


--
-- Name: posterior_samples; Type: TABLE; Schema: public; Owner: -; Tablespace:
--
Expand Down Expand Up @@ -2448,6 +2534,14 @@ ALTER TABLE ONLY treatments
ADD CONSTRAINT treatments_pkey PRIMARY KEY (id);


--
-- Name: unique_names_per_modeltype; Type: CONSTRAINT; Schema: public; Owner: -; Tablespace:
--

ALTER TABLE ONLY pfts
ADD CONSTRAINT unique_names_per_modeltype UNIQUE (name, modeltype_id);


--
-- Name: users_pkey; Type: CONSTRAINT; Schema: public; Owner: -; Tablespace:
--
Expand Down Expand Up @@ -2480,6 +2574,13 @@ ALTER TABLE ONLY yields
ADD CONSTRAINT yields_pkey PRIMARY KEY (id);


--
-- Name: cultivar_pft_uniqueness; Type: INDEX; Schema: public; Owner: -; Tablespace:
--

CREATE UNIQUE INDEX cultivar_pft_uniqueness ON cultivars_pfts USING btree (pft_id, cultivar_id);


--
-- Name: index_citations_on_user_id; Type: INDEX; Schema: public; Owner: -; Tablespace:
--
Expand Down Expand Up @@ -2990,6 +3091,66 @@ COMMENT ON TRIGGER restrict_trait_range ON traits IS 'Trigger function to ensure
A NULL in the min or max column means "no limit".';


--
-- Name: cultivar_exists; Type: FK CONSTRAINT; Schema: public; Owner: -
--

ALTER TABLE ONLY cultivars_pfts
ADD CONSTRAINT cultivar_exists FOREIGN KEY (cultivar_id) REFERENCES cultivars(id) ON UPDATE CASCADE;


--
-- Name: CONSTRAINT cultivar_exists ON cultivars_pfts; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON CONSTRAINT cultivar_exists ON cultivars_pfts IS 'Ensure the referred-to cultivar exists, block its deletion if it is being used in a pft, and update the reference if the cultivar id number changes.';


--
-- Name: pft_exists; Type: FK CONSTRAINT; Schema: public; Owner: -
--

ALTER TABLE ONLY cultivars_pfts
ADD CONSTRAINT pft_exists FOREIGN KEY (pft_id) REFERENCES pfts(id) ON UPDATE CASCADE ON DELETE CASCADE;


--
-- Name: CONSTRAINT pft_exists ON cultivars_pfts; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON CONSTRAINT pft_exists ON cultivars_pfts IS 'Ensure the referred-to pft exists, and clean up any references to it if it is deleted or updated.';


--
-- Name: pft_exists; Type: FK CONSTRAINT; Schema: public; Owner: -
--

ALTER TABLE ONLY pfts_species
ADD CONSTRAINT pft_exists FOREIGN KEY (pft_id) REFERENCES pfts(id) ON UPDATE CASCADE ON DELETE CASCADE NOT VALID;


--
-- Name: CONSTRAINT pft_exists ON pfts_species; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON CONSTRAINT pft_exists ON pfts_species IS 'Ensure the referred-to pft exists, and clean up any references to it if it is deleted or updated.';


--
-- Name: species_exists; Type: FK CONSTRAINT; Schema: public; Owner: -
--

ALTER TABLE ONLY pfts_species
ADD CONSTRAINT species_exists FOREIGN KEY (specie_id) REFERENCES species(id) ON UPDATE CASCADE NOT VALID;


--
-- Name: CONSTRAINT species_exists ON pfts_species; Type: COMMENT; Schema: public; Owner: -
--

COMMENT ON CONSTRAINT species_exists ON pfts_species IS 'Ensure the referred-to species exists, block its deletion if it is used in a pft, and update the reference if the species id number changes.';


--
-- PostgreSQL database dump complete
--
Expand Down

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