Skip to content

BETYdb 4.3

Compare
Choose a tag to compare
@gsrohde gsrohde released this 09 Sep 20:27
· 884 commits to master since this release

DOI

This release implements some long-standing requested database changes, replaces awkward selection boxes used in some forms with autocompletion-enabled fields, and fixes some bugs with cloning of PFTs and generation of Priors images.

The primary motivation for this release was to implement a long-standing request to eliminate some unneeded database tables and columns (and the Rails machinery associated with them), replace the formats.mime_type column with a foreign-key column referencing the mimetypes table, and add some date and entity-related columns to the yields table similar to those that already exist in the traits table.

Along with this, several usability improvements and bug fixes have been implemented.

Changes Pertinent to PEcAn Users

Administrators need to do a database migration.

See "Database Changes" below.

Summary of Changes

New Features

Autocompletion fields

Several of the Web forms for creating new entities and editing existing ones contained very lengthy selection lists for choosing (for example) the variable associated with a trait or the list of priors associated with a pft. These have been replaced with autocompletion fields so that typing characters into the field filters the list of options down to only those options containing that sequence in (one of certain designated columns of) the entity being selected.

Bug Fixes

  • The update to Rails 2 broke the on-the-fly generation of images associated with Priors. This has been fixed.
  • Cloning of PFTs would fail in some cases because we have imposed stricter validation of species objects. (For example, when you create a new species, the scientificname must textually include both the Genus name and the species name.) Many existing species rows fail the validation requirements. For this reason, we have turned off validation of associated species when cloning a PFT.

Steps Needed for Upgrade

Database Changes

Administrators need to do database migrations!

There is one migration in this release. It removes the inputs_variables, location_yields, and counties tables. It removes the start_date and end_date columns from the runs table. It replaces the mime_type column in the formats table with mimetype_id, a foreign key referencing the mimetypes table. And it adds four columns to the yields table: entity_id, date_year, date_month, and date_day.

The database version for this release is 20150904184512.

Status of RSpec Tests

  • All tests non-Javascript based tests pass. These may be run with the command

    bundle exec rspec -t ~js
    
  • Most of the Javascript-based tests pass, but one of them seems to pass only intermittently.

The Javascript-based tests may be run with the command

 bundle exec rspec -t js

The test that sometimes fails begins at line 36 of the file spec/features/management_integration_spec.rb and may be run with the command

 bundle exec rspec ./spec/features/management_integration_spec.rb:36

It seems that the feature this test tests does in fact work, but an issue has been created to note the problem with this test.

Complete details for running the rspec tests are on the updated Wiki page at https://github.com/PecanProject/bety/wiki/Automated-Tests