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Merge pull request #2592 from infotroph/travis_r_4
Travis fixes for R 4.0
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| ## Drafts of documentation for package datasets | ||
| ## | ||
| ## Written by CKB 2020-05-03, then commented out when I realized that as | ||
| ## written we need to enable lazy-loading of package data to use these. | ||
| ## TODO in this order: | ||
| ## * Inspect all datasets, determine whether lazy-loading them into package | ||
| ## namespace will cause any issues | ||
| ## * make any changes needed to resolve issues identified above | ||
| ## * Change DESCRIPTION line to read `LazyData: true` | ||
| ## * Uncomment this file, delete this header block | ||
| ## * run Roxygen, commit resulting Rd files | ||
|
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| # #' 2010 CRUNCEP weather data for Urbana, IL | ||
| # #' | ||
| # #' Hourly 2010 meteorology for the 0.5-degree grid cell containing the | ||
| # #' EBI Energy Farm (Urbana, IL), as obtained from the CRUNCEP | ||
| # #' 6-hourly product. | ||
| # #' Please see the `compare_narr_cruncep_met` vignette for details of a | ||
| # #' comparison between this and the `narr`, `narr3h`, and `ebifarm` datasets. | ||
| # #' | ||
| # #' @format A data frame with 8736 rows and 10 columns: | ||
| # #' \describe{ | ||
| # #' \item{date}{POSIXct timestamp} | ||
| # #' \item{year, doy, hour}{integer, extracted from `date`} | ||
| # #' \item{solarR}{solar radiation, in umol/h/m2} | ||
| # #' \item{DailyTemp.C}{air temperature, in degrees C} | ||
| # #' \item{RH}{relative humidity, in percent} | ||
| # #' \item{WindSpeed}{wind speed, in m/s} | ||
| # #' \item{precip}{precipitation rate, in mm/h} | ||
| # #' \item{source}{dataset identifier, in this case always "cruncep"}} | ||
| # #' @seealso \code{\link{narr}} \code{\link{narr3h}} \code{\link{ebifarm}} | ||
| # "cruncep" | ||
| # | ||
| # | ||
| # #' Global 0.5 degree land/water mask for the CRUNCEP dataset | ||
| # #' | ||
| # #' For details, please see the CRUNCEP scripts included with this package: | ||
| # #' `system.file("scripts/cruncep", package = "PEcAn.data.atmosphere")` | ||
| # #' | ||
| # #' @format a data frame with 259200 rows and 3 columns: | ||
| # #' \describe{ | ||
| # #' \item{lat}{latitude, in decimal degrees} | ||
| # #' \item{lon}{longitude, in decimal degrees} | ||
| # #' \item{land}{logical. TRUE = land, FALSE = water}} | ||
| # "cruncep_landmask" | ||
| # | ||
| # | ||
| # #' 2010 weather station data from near Urbana, IL | ||
| # #' | ||
| # #' Hourly 2010 weather data collected at the EBI Energy Farm (Urbana, IL). | ||
| # #' Please see the `compare_narr_cruncep_met` vignette for details of a | ||
| # #' comparison between this and the `narr`, `narr3h`, and `cruncep` datasets. | ||
| # #' | ||
| # #' @format A data frame with 8390 rows and 10 columns: | ||
| # #' \describe{ | ||
| # #' \item{date}{POSIXct timestamp} | ||
| # #' \item{year, doy, hour}{integer, extracted from `date`} | ||
| # #' \item{Temp}{air temperature, in degrees C} | ||
| # #' \item{RH}{relative humidity, in percent} | ||
| # #' \item{precip}{precipitation rate, in mm/h} | ||
| # #' \item{wind}{wind speed, in m/s} | ||
| # #' \item{solar}{solar radiation, in umol/h/m2} | ||
| # #' \item{source}{dataset identifier, in this case always "ebifarm"}} | ||
| # #' @seealso \code{\link{cruncep}} \code{\link{narr}} \code{\link{narr3h}} | ||
| # "ebifarm" | ||
| # | ||
| # | ||
| # #' Codes and BeTY IDs for sites in the FLUXNET network | ||
| # #' | ||
| # #' @format a data frame with 698 rows and 2 columns: | ||
| # #' \describe{ | ||
| # #' \item{FLUX.id}{character identifier used by FLUXNET, | ||
| # #' e.g. Niwot Ridge USA is `US-NR1`} | ||
| # #' \item{site.id}{identifier used in the `sites` table of the PEcAn | ||
| # #' database. Integer, but stored as character}} | ||
| # "FLUXNET.sitemap" | ||
| # | ||
| # | ||
| # #' Global land/water mask for the NCEP dataset | ||
| # #' | ||
| # #' For details, please see the NCEP scripts included with this package: | ||
| # #' `system.file("scripts/ncep", package = "PEcAn.data.atmosphere")` | ||
| # #' | ||
| # #' @format a data frame with 18048 rows and 3 columns: | ||
| # #' \describe{ | ||
| # #' \item{lat}{latitude, in decimal degrees} | ||
| # #' \item{lon}{longitude, in decimal degrees} | ||
| # #' \item{land}{logical. TRUE = land, FALSE = water}} | ||
| # "landmask" | ||
| # | ||
| # | ||
| # #' Latitudes of 94 sites from the NCEP dataset | ||
| # #' | ||
| # #' For details, please see the NCEP scripts included with this package: | ||
| # #' `system.file("scripts/ncep", package = "PEcAn.data.atmosphere")` | ||
| # #' | ||
| # #' @format a vector of 94 decimal values | ||
| # "Lat" | ||
| # | ||
| # | ||
| # #' Longitudes of 192 sites from the NCEP dataset | ||
| # #' | ||
| # #' For details, please see the NCEP scripts included with this package: | ||
| # #' `system.file("scripts/ncep", package = "PEcAn.data.atmosphere")` | ||
| # #' | ||
| # #' @format a vector of 192 decimal values | ||
| # "Lon" | ||
| # | ||
| # | ||
| # #' 2010 NARR weather data for Urbana, IL | ||
| # #' | ||
| # #' Hourly 2010 meteorology for the 0.3-degree grid cell containing the | ||
| # #' EBI Energy Farm (Urbana, IL), as obtained from the NARR daily product. | ||
| # #' Please see the `compare_narr_cruncep_met` vignette for details of a | ||
| # #' comparison between this and the `cruncep`, `narr3h`, and `ebifarm` datasets. | ||
| # #' | ||
| # #' @format A data frame with 8760 rows and 10 columns: | ||
| # #' \describe{ | ||
| # #' \item{date}{POSIXct timestamp} | ||
| # #' \item{year, doy, hour}{integer, extracted from `date`} | ||
| # #' \item{SolarR}{solar radiation, in umol/h/m2} | ||
| # #' \item{Temp}{air temperature, in degrees C} | ||
| # #' \item{RH}{relative humidity, in percent} | ||
| # #' \item{WS}{wind speed, in m/s} | ||
| # #' \item{precip}{precipitation rate, in mm/h} | ||
| # #' \item{source}{dataset identifier, in this case always "narr"}} | ||
| # #' @seealso \code{\link{cruncep}} \code{\link{ebifarm}} \code{\link{narr3h}} | ||
| # "narr" | ||
| # | ||
| # | ||
| # #' 2010 NARR 3-hourly weather data for Urbana, IL | ||
| # #' | ||
| # #' Hourly 2010 meteorology for the 0.25-degree grid cell containing the | ||
| # #' EBI Energy Farm (Urbana, IL), as obtained from the NARR 3-hourly product. | ||
| # #' Please see the `compare_narr_cruncep_met` vignette for details of a | ||
| # #' comparison between this and the `cruncep`, `narr`, and `ebifarm` datasets. | ||
| # #' | ||
| # #' @format A data frame with 8736 rows and 10 columns: | ||
| # #' \describe{ | ||
| # #' \item{date}{POSIXct timestamp} | ||
| # #' \item{year, doy, hour}{integer, extracted from `date`} | ||
| # #' \item{solarR}{solar radiation, in umol/h/m2} | ||
| # #' \item{DailyTemp.C}{air temperature, in degrees C} | ||
| # #' \item{RH}{relative humidity, in percent} | ||
| # #' \item{WindSpeed}{wind speed, in m/s} | ||
| # #' \item{precip}{precipitation rate, in mm/h} | ||
| # #' \item{source}{dataset identifier, in this case always "narr3h"}} | ||
| # #' @seealso \code{\link{cruncep}} \code{\link{ebifarm}} \code{\link{narr}} | ||
| # "narr3h" |
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| FLUXNET.sitemap <- utils::read.csv( | ||
| file = "FLUXNET.sitemap.csv", | ||
| colClasses = "character", | ||
| row.names = 1) |
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