convert last uses of deprecated PEcAn.utils::logger* to PEcAn.logger::loger*

[infotroph]

Description

The logger functions in PEcAn.utils have been deprecated for several years and will be removed entirely in #2830.

These are the only remaining uses of them I could find in the codebase, but if you're reading this please check all your local scripts and update them now!

Motivation and Context

Review Time Estimate

• Immediately
• Within one week
• When possible

Types of changes

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

• My change requires a change to the documentation.
• I have updated the CHANGELOG.md.
• I have updated the documentation accordingly.
• I have read the CONTRIBUTING document.
• I have added tests to cover my changes.
• All new and existing tests passed.