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Popular repositories

  1. TranscriptionFactorProfiling TranscriptionFactorProfiling Public

    Profiling of transcription factor binding sites in cell-free DNA

    Python 23 11

  2. Nucleosome_ctDNA Nucleosome_ctDNA Public

    Inferring expressed genes by whole-genome sequencing of plasma DNA

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  3. PlasmaSeq PlasmaSeq Public

    Analyze CNVs of ctDNA

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  4. NPH NPH Public

    Make use of nucleosome protection hypothesis to infer functional aspects of ctDNA

    Python 2 1

  5. ExpressionPrediction ExpressionPrediction Public

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  6. UMIAnalysis UMIAnalysis Public

    Analyze next-generation sequencing experiments with unique molecular identifiers (UMI)

    Python 1 1