scRNAseq-AML

single cell analysis on Acute Myeloid Leukemia dataset
Machine learning-guided cell typing, idenfication of tumor cells

Name		Name	Last commit message	Last commit date
Latest commit History 79 Commits
.gitignore		.gitignore
AML_differential_expression.R		AML_differential_expression.R
AML_expression_pipeline.R		AML_expression_pipeline.R
FileQC-and.analysis.R		FileQC-and.analysis.R
GSEA.R		GSEA.R
InferCNV_CMD.R		InferCNV_CMD.R
KNNclustering.R		KNNclustering.R
LICENSE		LICENSE
Prot-genomics.R		Prot-genomics.R
README.md		README.md
RNAseq_data_preprocessing_SCT.R		RNAseq_data_preprocessing_SCT.R
Run-gsva-on-single-cell.R		Run-gsva-on-single-cell.R
Run-gsva-single-cell-server.R		Run-gsva-single-cell-server.R
Signatures-for-AML.gmt		Signatures-for-AML.gmt
T_cell_signature.R		T_cell_signature.R
aml_dataset_annotation.R		aml_dataset_annotation.R
bmcite.R		bmcite.R
data_transform.R		data_transform.R
human_bm_reference.R		human_bm_reference.R
human_bm_reference_cmd.R		human_bm_reference_cmd.R
inferCNV.R		inferCNV.R
patient_treatment_analysis.R		patient_treatment_analysis.R
predict.R		predict.R
prediction_analysis.R		prediction_analysis.R
remote_data_integration_bmcite_samples.R		remote_data_integration_bmcite_samples.R
rpca_integration.R		rpca_integration.R
test.R		test.R
training.R		training.R
visualization.R		visualization.R

PinaColadast/scRNAseq-AML