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0.8.1

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@wyli wyli released this 16 Feb 23:46

Added

  • Support of spatial 2D for ViTAutoEnc
  • Support of dataframe object input in CSVDataset
  • Support of tensor backend for Orientation
  • Support of configurable delimiter for CSV writers
  • A base workflow API
  • DataFunc API for dataset-level preprocessing
  • write_scalar API for logging with additional engine parameter in TensorBoardHandler
  • Enhancements for NVTX Range transform logging
  • Enhancements for set_determinism
  • Performance enhancements in the cache-based datasets
  • Configurable metadata keys for monai.data.DatasetSummary
  • Flexible kwargs for WSIReader
  • Logging for the learning rate schedule handler
  • GridPatchDataset as subclass of monai.data.IterableDataset
  • is_onehot option in KeepLargestConnectedComponent
  • channel_dim in the image readers and support of stacking images with channels
  • Support of matshow3d with given channel_dim
  • Skipping workflow run if epoch length is 0
  • Enhanced CacheDataset to avoid duplicated cache items
  • save_state utility function

Changed

  • Optionally depend on PyTorch-Ignite v0.4.8 instead of v0.4.6
  • monai.apps.mmars.load_from_mmar defaults to the latest version

Fixed

  • Issue when caching large items with pickle
  • Issue of hard-coded activation functions in ResBlock
  • Issue of create_file_name assuming local disk file creation
  • Issue of WSIReader when the backend is TiffFile
  • Issue of deprecated_args when the function signature contains kwargs
  • Issue of channel_wise computations for the intensity-based transforms
  • Issue of inverting OneOf
  • Issue of removing temporary caching file for the persistent dataset
  • Error messages when reader backend is not available
  • Output type casting issue in ScaleIntensityRangePercentiles
  • Various docstring typos and broken URLs
  • mode in the evaluator engine
  • Ordering of Orientation and Spacing in monai.apps.deepgrow.dataset

Removed

  • Additional deep supervision modules in DynUnet
  • Deprecated reduction argument for ContrastiveLoss
  • Decollate warning in Workflow
  • Unique label exception in ROCAUCMetric
  • Logger configuration logic in the event handlers