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| # Sphinx build info version 1 | ||
| # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. | ||
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| <!DOCTYPE html> | ||
| <!--[if IE 8]><html class="no-js lt-ie9" lang="Python" > <![endif]--> | ||
| <!--[if gt IE 8]><!--> <html class="no-js" lang="Python" > <!--<![endif]--> | ||
| <head> | ||
| <meta charset="utf-8"> | ||
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| <meta name="viewport" content="width=device-width, initial-scale=1.0"> | ||
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| <title>scaks — scaks scaks documentation</title> | ||
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| <link rel="stylesheet" href="../_static/css/theme.css" type="text/css" /> | ||
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| <a href="../index.html" class="icon icon-home"> scaks | ||
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| </a> | ||
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| <div class="version"> | ||
| v1.0.0 | ||
| </div> | ||
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| <p class="caption"><span class="caption-text">Contents:</span></p> | ||
| <ul> | ||
| <li class="toctree-l1"><a class="reference internal" href="../intro.html">Introduction</a></li> | ||
| <li class="toctree-l1"><a class="reference internal" href="../install.html">Installation</a></li> | ||
| <li class="toctree-l1"><a class="reference internal" href="../tutorial/index.html">Tutorial</a></li> | ||
| <li class="toctree-l1"><a class="reference internal" href="../api/index.html">API</a></li> | ||
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| <li><a href="index.html">Module code</a> »</li> | ||
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| <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article"> | ||
| <div itemprop="articleBody"> | ||
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| <h1>Source code for scaks</h1><div class="highlight"><pre> | ||
| <span></span><span class="kn">import</span> <span class="nn">time</span> | ||
| <span class="kn">import</span> <span class="nn">sys</span> | ||
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| <span class="kn">from</span> <span class="nn">.functions</span> <span class="k">import</span> <span class="o">*</span> | ||
| <span class="kn">from</span> <span class="nn">.errors.error</span> <span class="k">import</span> <span class="o">*</span> | ||
| <span class="kn">from</span> <span class="nn">.compatutil</span> <span class="k">import</span> <span class="n">pickle</span> | ||
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| <span class="n">__version__</span> <span class="o">=</span> <span class="s1">'1.0.0'</span> | ||
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| <span class="n">file_header</span> <span class="o">=</span> <span class="p">(</span> | ||
| <span class="s1">'# This file was automatically generated by scaks'</span> <span class="o">+</span> | ||
| <span class="s1">' (https://github.com/PytLab/scaks).</span><span class="se">\n</span><span class="s1">'</span> <span class="o">+</span> | ||
| <span class="s1">'# Version </span><span class="si">%s</span><span class="se">\n</span><span class="s1"># Date: </span><span class="si">%s</span><span class="s1"> </span><span class="se">\n</span><span class="s1">#</span><span class="se">\n</span><span class="s1">'</span> <span class="o">+</span> | ||
| <span class="s1">'# Do not make changes to this file '</span> <span class="o">+</span> | ||
| <span class="s1">'unless you know what you are doing</span><span class="se">\n\n</span><span class="s1">'</span><span class="p">)</span> <span class="o">%</span> <span class="p">(</span><span class="n">__version__</span><span class="p">,</span> <span class="n">time</span><span class="o">.</span><span class="n">asctime</span><span class="p">())</span> | ||
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| <span class="c1">#-------------------------------------------------------</span> | ||
| <span class="c1"># Some base classes for kinetic model are defined below |</span> | ||
| <span class="c1">#-------------------------------------------------------</span> | ||
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| <span class="k">class</span> <span class="nc">ModelShell</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span> | ||
| <span class="sd">"""</span> | ||
| <span class="sd"> A non-functional parent class to be inherited by</span> | ||
| <span class="sd"> other tools class of kinetic model.</span> | ||
| <span class="sd"> """</span> | ||
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| <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">owner</span><span class="p">):</span> | ||
| <span class="bp">self</span><span class="o">.</span><span class="n">_owner</span> <span class="o">=</span> <span class="n">owner</span> | ||
| <span class="bp">self</span><span class="o">.</span><span class="n">_archived_data_dict</span> <span class="o">=</span> <span class="p">{}</span> | ||
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| <span class="k">def</span> <span class="nf">archive_data</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data_name</span><span class="p">,</span> <span class="n">data</span><span class="p">):</span> | ||
| <span class="sd">"""</span> | ||
| <span class="sd"> Update data dict and dump it to data file.</span> | ||
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| <span class="sd"> :param data_name: key in data dict</span> | ||
| <span class="sd"> :type data_name: str</span> | ||
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| <span class="sd"> :param data: value in data dict</span> | ||
| <span class="sd"> :type data: any</span> | ||
| <span class="sd"> """</span> | ||
| <span class="c1"># Update data dict.</span> | ||
| <span class="k">if</span> <span class="n">data_name</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">_owner</span><span class="o">.</span><span class="n">archived_variables</span><span class="p">:</span> | ||
| <span class="bp">self</span><span class="o">.</span><span class="n">_archived_data_dict</span><span class="p">[</span><span class="n">data_name</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span> | ||
| <span class="c1"># Dump data dict to data file</span> | ||
| <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">_archived_data_dict</span><span class="p">:</span> | ||
| <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_owner</span><span class="o">.</span><span class="n">data_file</span><span class="p">,</span> <span class="s1">'wb'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span> | ||
| <span class="n">pickle</span><span class="o">.</span><span class="n">dump</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">_archived_data_dict</span><span class="p">,</span> <span class="n">f</span><span class="p">)</span> | ||
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| <span class="nd">@staticmethod</span> | ||
| <span class="k">def</span> <span class="nf">write2file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">line</span><span class="p">):</span> | ||
| <span class="n">f</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="s1">'a'</span><span class="p">)</span> | ||
| <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">line</span><span class="p">)</span> | ||
| <span class="n">f</span><span class="o">.</span><span class="n">close</span><span class="p">()</span> | ||
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| </pre></div> | ||
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| © Copyright 2018, Zhengjiang Shao. | ||
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