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Develop #15

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merged 58 commits into from Mar 7, 2019
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2a98bc5
fixed laplacian of aos
eginer Jan 28, 2019
dd5a451
corrected the laplacians of aos
eginer Jan 29, 2019
3315d98
added dft_one_e
eginer Jan 29, 2019
9762b51
added new feature for new dft functionals
eginer Jan 29, 2019
a20dfde
changed the configure to add new functionals
eginer Jan 30, 2019
ab5fd75
Merge branch 'develop' of https://github.com/QuantumPackage/qp2 into …
eginer Jan 30, 2019
1ae6af7
changed the configure
eginer Jan 30, 2019
ecaa190
Merge branch 'develop' into develop_manu
eginer Jan 30, 2019
e41e34b
Merge branch 'develop' into develop_manu
eginer Feb 1, 2019
981b563
added dft_one_e/README.rst
eginer Feb 4, 2019
44b9318
added README.rst in new_functionals
eginer Feb 4, 2019
6ffdccb
added source/programmers_guide/new_ks.rst
eginer Feb 4, 2019
4759309
Merge branch 'develop' of https://github.com/QuantumPackage/qp2 into …
eginer Feb 6, 2019
977ccba
merge
eginer Feb 6, 2019
c3aa9db
Merge branch 'master' into develop
eginer Feb 6, 2019
1097b44
Thesis Yann
scemama Feb 6, 2019
e11b04e
Added gmp installation in configure
scemama Feb 6, 2019
f1fe33a
improved qp_e_conv_fci
eginer Feb 6, 2019
ee63bd0
Doc
scemama Feb 6, 2019
d820421
Typos
scemama Feb 8, 2019
407ab27
Added variance_max
scemama Feb 11, 2019
0aa10ac
Fixed completion in qp_create
scemama Feb 11, 2019
5839f66
modif TODO
eginer Feb 11, 2019
bdb1a76
Merge branch 'master' of https://github.com/QuantumPackage/qp2
eginer Feb 11, 2019
a298349
fixed DFT potential for n_states gt 1
eginer Feb 11, 2019
0e530b9
improved pot pbe
eginer Feb 11, 2019
025ecdf
trying to improve sr PBE
eginer Feb 11, 2019
f618ae1
fixed potential pbe
eginer Feb 11, 2019
598cae7
fixed the vxc smashed for pbe sr and normal
eginer Feb 11, 2019
1e35816
merged
eginer Feb 11, 2019
667ad77
Comments in selection
scemama Feb 14, 2019
ee20f8e
bug fixed by peter
eginer Feb 18, 2019
e347ea6
Fixed bug with zero beta electrons
scemama Feb 20, 2019
c702cd6
Merge branch 'master' into develop-manus
scemama Feb 21, 2019
2783eab
Merge branch 'develop' into develop-manus
scemama Feb 21, 2019
0172523
Update README.rst
scemama Feb 21, 2019
23f4b80
Update e_xc_new_func.irp.f
scemama Feb 21, 2019
ec94d7f
Update links.rst
scemama Feb 21, 2019
2435af3
Update quickstart.rst
scemama Feb 21, 2019
cc21e47
Update quickstart.rst
scemama Feb 21, 2019
acf153a
updated cipsi
eginer Feb 21, 2019
f5ecf72
Develop manus (#8)
scemama Feb 21, 2019
ca4f8eb
Fixed energies of non-expected s2 (#9)
scemama Feb 22, 2019
347e918
Add print_ci_vector in tools (#11)
scemama Mar 4, 2019
81bc60e
Merge develop-toto and manus (#12)
scemama Mar 6, 2019
1b10277
Develop toto (#13)
scemama Mar 7, 2019
c65ecce
Develop manus (#14)
scemama Mar 7, 2019
4ba8ad7
Changed python into python2
scemama Mar 7, 2019
79748da
from_xyz suppressed
scemama Mar 7, 2019
9c361c8
Cleaning repo
scemama Mar 7, 2019
e914b95
Update README.md
scemama Mar 7, 2019
97db863
Update README.md
scemama Mar 7, 2019
6a56ed9
Contributors
scemama Mar 7, 2019
b35faad
Merge branch 'develop' of github.com:QuantumPackage/qp2 into develop
scemama Mar 7, 2019
6e0713e
Update GITHUB.md
scemama Mar 7, 2019
5ae479b
Merge branch 'develop' of github.com:QuantumPackage/qp2 into develop
scemama Mar 7, 2019
310701b
Merge branch 'master' into develop
scemama Mar 7, 2019
4cefdc7
bibtex
scemama Mar 7, 2019
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15 changes: 11 additions & 4 deletions GITHUB.md
@@ -1,15 +1,22 @@
GitHub Branches
===============

master
master:
The current up-to-date working branch, that users download It should
only contain the latest release and bug fixes.

develop
develop-lcpq:
Toulouse development branch

develop-lct:
Paris development branch

develop:
It is a fork of the *master* branch with new developments that will be
merged in the *master* branch for the next release.
merged in the *master* branch for the next release. Other development
branches should be merged on this one.

gh-pages
gh-pages:
This is an independent branch, containing only the web site of QP2.


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15 changes: 10 additions & 5 deletions README.md
@@ -1,6 +1,10 @@
# Quantum Package
# Quantum Package 2.0


*Quantum package 2.0: an open-source determinant-driven suite of programs*\
Y. Garniron, K. Gasperich, T. Applencourt, A. Benali, A. Ferté, J. Paquier, B. Pradines, R. Assaraf, P. Reinhardt, J. Toulouse, P. Barbaresco, N. Renon, G. David, J. P. Malrieu, M. Véril, M. Caffarel, P. F. Loos, E. Giner and A. Scemama\
https://arxiv.org/abs/1902.08154

A programming environment for wave function methods

![QP](https://raw.githubusercontent.com/QuantumPackage/qp2/master/data/qp2.png)

Expand All @@ -12,9 +16,10 @@ A programming environment for wave function methods

# Build status

* Master: [![master build status](https://travis-ci.org/QuantumPackage/qp2.svg?branch=master)](https://travis-ci.org/QuantumPackage/qp2)
* Development branch : [![dev build status](https://travis-ci.org/QuantumPackage/qp2.svg?branch=develop)](https://travis-ci.org/QuantumPackage/qp2)
* Documentation [![Doc Status](https://quantum-package.readthedocs.io/en/latest/?badge=master)
* Master [![master build status](https://travis-ci.org/QuantumPackage/qp2.svg?branch=master)](https://travis-ci.org/QuantumPackage/qp2)
* Development [![dev build status](https://travis-ci.org/QuantumPackage/qp2.svg?branch=develop)](https://travis-ci.org/QuantumPackage/qp2)
* Documentation [![Documentation Status](https://readthedocs.org/projects/quantum-package/badge/?version=master)](https://quantum-package.readthedocs.io/en/master/?badge=master)



# Credits
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637 changes: 637 additions & 0 deletions REPLACE 100644 → 100755

Large diffs are not rendered by default.

9 changes: 9 additions & 0 deletions TODO
Expand Up @@ -57,13 +57,22 @@ Doc: plugins et qp_plugins

Ajouter les symetries dans devel

<<<<<<< HEAD
Compiler ezfio avec openmp

# Parallelize i_H_psi
=======

# Parallelize i_H_psi
<<<<<<< HEAD
=======


>>>>>>> minor_modifs
IMPORTANT:

Davidson Diagonalization
------------------------

Not enough memory: aborting in davidson_diag_hjj_sjj
>>>>>>> 94bacff2d093aa9b32c653ab59bcdb79d13f3264
9 changes: 6 additions & 3 deletions bin/qp_plugins
Expand Up @@ -116,9 +116,12 @@ def main(arguments):
d_tmp[x] = y
repo_of_plugin[y] = x.replace(QP_PLUGINS+'/','')
l_repository = d_tmp.keys()
m_instance = ModuleHandler(l_repository)
l_plugins = [module for module in m_instance.l_module]
l_result = l_plugins
if l_repository == []:
l_result = []
else:
m_instance = ModuleHandler(l_repository)
l_plugins = [module for module in m_instance.l_module]
l_result = l_plugins

if arguments["--installed"] or arguments["--uninstalled"]:
# Search in src all symbolic links that are modules
Expand Down
4 changes: 3 additions & 1 deletion bin/qp_set_frozen_core
Expand Up @@ -52,8 +52,10 @@ def main(arguments):
pass
elif charge < 13:
n_frozen += 1
else:
elif charge < 31:
n_frozen += 5
else:
n_frozen += 9

mo_num = ezfio.mo_basis_mo_num

Expand Down
2 changes: 1 addition & 1 deletion config/gfortran_debug.cfg
Expand Up @@ -51,7 +51,7 @@ FCFLAGS : -Ofast
# -g : Extra debugging information
#
[DEBUG]
FCFLAGS : -g -msse4.2 -fcheck=all -Waliasing -Wampersand -Wconversion -Wsurprising -Wintrinsics-std -Wno-tabs -Wintrinsic-shadow -Wline-truncation -Wreal-q-constant
FCFLAGS : -g -msse4.2 -fcheck=all -Waliasing -Wampersand -Wconversion -Wsurprising -Wintrinsics-std -Wno-tabs -Wintrinsic-shadow -Wline-truncation -Wreal-q-constant -Wuninitialized

# OpenMP flags
#################
Expand Down
6 changes: 0 additions & 6 deletions configure
Expand Up @@ -9,12 +9,6 @@ eval set -- "$TEMP"
export QP_ROOT="$( cd "$(dirname "$0")" ; pwd -P )"
echo "QP_ROOT="$QP_ROOT

# Check if the module to create new DFT functionals exists or not
if [[ ! -d ${QP_ROOT}/src/new_functionals ]] ; then
cp -r ${QP_ROOT}/scripts/functionals/do_not_touch_func ${QP_ROOT}/src/new_functionals
fi



function help()
{
Expand Down
4 changes: 1 addition & 3 deletions docs/Makefile
Expand Up @@ -18,9 +18,7 @@ auto:

# Catch-all target: route all unknown targets to Sphinx using the new
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
%: Makefile
%: Makefile
@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)

clone:
git clone git@github.com:QuantumPackage/qp2.git --branch=documentation build

2 changes: 1 addition & 1 deletion docs/source/_static/links.rst
Expand Up @@ -38,7 +38,7 @@
.. |OPAM| replace:: `OPAM`_
.. |Python| replace:: `Python`_
.. |qp| replace:: *Quantum Package*
.. |QP| replace:: |qp|
.. |QP| replace:: *Quantum Package*
.. |qpsh| replace:: *Quantum Package Shell*
.. |QPSH| replace:: |qpsh|
.. |resultsFile| replace:: `resultsFile`_
Expand Down
8 changes: 7 additions & 1 deletion docs/source/appendix/contributors.rst
Expand Up @@ -25,19 +25,25 @@ Thomas Applencourt



The following people have contributed (by alphabetical order):
The following people have contributed to this project (by alphabetical order):

* Roland Assaraf
* Pierrette Barbaresco
* Anouar Benali
* Chandler Bennet
* Michel Caffarel
* Grégoire David
* Anthony Ferté
* Madeline Galbraith
* Yann Garniron
* Kevin Gasperich
* Pierre-François Loos
* Jean-Paul Malrieu
* Barry Moore
* Julien Paquier
* Barthélémy Pradines
* Peter Reinhardt
* Nicolas Renon
* Lorenzo Tenti
* Julien Toulouse
* Mikaël Véril
Expand Down
1 change: 1 addition & 0 deletions docs/source/modules/.gitignore
@@ -0,0 +1 @@