fully functioning create network and cytopanel start

RBVI · Aug 27, 2023 · 1e06678 · 1e06678
1 parent 976ea7c
commit 1e06678
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Showing 5 changed files with 666 additions and 293 deletions.
diff --git a/src/main/java/be/kuleuven/mgG/internal/model/MGGManager.java b/src/main/java/be/kuleuven/mgG/internal/model/MGGManager.java
@@ -34,6 +34,8 @@
 import be.kuleuven.mgG.internal.tasks.ImportFileTaskFactory;
 import be.kuleuven.mgG.internal.tasks.SendDataToServerTaskFactory;
 import be.kuleuven.mgG.internal.view.JSONDisplayPanel;
+import be.kuleuven.mgG.internal.view.MGGCytoPanel;
+
 
 import org.cytoscape.application.CyApplicationManager;
 import org.cytoscape.application.events.SetCurrentNetworkListener;
@@ -79,9 +81,11 @@ public class MGGManager implements SessionAboutToBeSavedListener, SessionLoadedL
 
 	final AvailableCommands availableCommands;
 	final CommandExecutorTaskFactory ceTaskFactory;
+	//-----------------------------------------------------------
+	private MGGCytoPanel cytoPanel = null;
 
-
-
+	  private CyNetwork newNetwork = null;
+	//----------------------------------------------------------
 	private JSONObject jsonObject;
 	private JSONObject serverResponse;
 
@@ -157,6 +161,21 @@ public JSONObject getServerResponse() {
         return this.serverResponse;
     }
 
+  //-----------------------------addition------------------------------for cytopanel------------------------------------------------------------------------------------------  
+
+    public void setCytoPanel(MGGCytoPanel panel) {
+  		this.cytoPanel = panel;
+  	}
+
+    public CyNetwork getCurrentNetwork() {
+		CyNetwork network = cyRegistrar.getService(CyApplicationManager.class).getCurrentNetwork();
+    if (network != null) return network;
+    return newNetwork;
+	}
+
+
+
+    //------------------------------------------------SErvice Register and execute Tasks-----------------------------------------------------------------------------------------------
 
     /**
      * Executes a set of tasks.
@@ -227,7 +246,7 @@ public void unregisterService(Object service, Class<?> serviceClass) {
 
 
 
-
+    //------------------------------------------------------------------------------------------------------------------------------------------------------------------------