Fix .d file creation, separate module folders #584
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Right now all .c file get compiled into the same folder: $(BINDIR).
The only exception are the user modules.
This is prone to naming clashes for different modules.
A prime example is the file "config.c" in the module config.
This diff separates the .o files per$(MODULE) subfolders in $ (BINDIR),
e.g.:
Further this patch fixes the creation of .d files. The patch enables the
creation of fresh .d files instead of using stale ones.
The patch was tested by compiling hello-world for all boards and
comparing the file sizes with and without he changes. The resulting
binaries were only tested for native.