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[Issue]: hipMemcpyWithStream causes severe stall in Hugginface Transformers LLM generation with Pytorch #78

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Epliz opened this issue May 3, 2024 · 3 comments

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@Epliz
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Epliz commented May 3, 2024

Problem Description

Hi,

When doing text generation with Mistral 7b with Hugginface transformers on a MI100 GPU, I can see in the collected torch trace that a lot of time is wasted due a hipMemcpyWithStream triggered by torch.multinomial. The hipMemcpyWithStream operation seems to return much later after the previously queued GPU kernels have finished executing.
For information, it is responsible for a ~6ms bubble out of ~40ms for the generation of 1 token.
Looks like optimizing it would have quite an impact for LLM generation (a trendy topic those days).

I would suspect some kind of exponential backoff somewhere that saturates to a way too long wait time maybe.


### Operating System

Ubuntu 22.04.3 LTS (x86_64)

### CPU

AMD Ryzen 7 5800X3D 8-Core Processor

### GPU

AMD Instinct MI100

### ROCm Version

ROCm 6.0.0

### ROCm Component

_No response_

### Steps to Reproduce

Minimal example to collect the trace that can be visualized for example with https://ui.perfetto.dev:
```python
from transformers import AutoModelForCausalLM, AutoTokenizer
import torch
import torch.nn as nn

model_id = "mistralai/Mistral-7B-Instruct-v0.2"
tokenizer = AutoTokenizer.from_pretrained(model_id,padding_side="left")

if tokenizer.pad_token is None:
    tokenizer.pad_token = tokenizer.eos_token

model: nn.Module = AutoModelForCausalLM.from_pretrained(model_id, torch_dtype=torch.float16).to(device="cuda", dtype=torch.float16)

from typing import List, Union


def generate(model, prompt:Union[str, List[str]], max_new_tokens=20) -> Union[str, List[str]]:
  single_prompt = isinstance(prompt, str)
  if single_prompt:
    prompts = [prompt]
  else:
    prompts = prompt

  with torch.no_grad():
    inputs = tokenizer(prompts, return_tensors="pt", padding="longest").to(device="cuda")
    outputs = model.generate(**inputs, max_new_tokens=max_new_tokens, do_sample=True)
    texts = tokenizer.batch_decode(outputs, skip_special_tokens=True)

  texts = [text[len(prompts[i]):] for i, text in enumerate(texts)]

  if single_prompt:
    return texts[0]
  else:
    return texts
  

def time_func(f):
  import time
  start_time = time.time()
  ret = f()
  end_time = time.time()
  elapsed_time = end_time - start_time
  return ret, elapsed_time

def profile_func(f, trace_path= "trace.json"):
  from torch.profiler import profile, ProfilerActivity
  with profile(activities=[ProfilerActivity.CPU, ProfilerActivity.CUDA]) as prof:
    ret = f()
  prof.export_chrome_trace(trace_path)
  return ret

text, time = time_func(lambda: generate(model, "Hello my name is", 50))
text, time = time_func(lambda: generate(model, "Hello my name is", 50))
text, time = time_func(lambda: generate(model, "Hello my name is", 50))
print("[Optimized] Completion: ", text)
print("[Optimized] Time: ", time)
text, time = profile_func(lambda: time_func(lambda: generate(model, "Hello my name is", 50)), trace_path="trace_orig.json")

### (Optional for Linux users) Output of /opt/rocm/bin/rocminfo --support

_No response_

### Additional Information

Environment:

PyTorch version: 2.3.0.dev20240204+rocm5.7
Is debug build: False
CUDA used to build PyTorch: N/A
ROCM used to build PyTorch: 5.7.31921-d1770ee1b

OS: Ubuntu 22.04.3 LTS (x86_64)
GCC version: (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
Clang version: Could not collect
CMake version: version 3.29.2
Libc version: glibc-2.35

Python version: 3.10.12 (main, Nov 20 2023, 15:14:05) [GCC 11.4.0] (64-bit runtime)
Python platform: Linux-6.5.0-28-generic-x86_64-with-glibc2.35
Is CUDA available: True
CUDA runtime version: Could not collect
CUDA_MODULE_LOADING set to: LAZY
GPU models and configuration: AMD Instinct MI100 (gfx908:sramecc+:xnack-)
Nvidia driver version: Could not collect
cuDNN version: Could not collect
HIP runtime version: 5.7.31921
MIOpen runtime version: 2.20.0
Is XNNPACK available: True

CPU:
Architecture: x86_64
CPU op-mode(s): 32-bit, 64-bit
Address sizes: 48 bits physical, 48 bits virtual
Byte Order: Little Endian
CPU(s): 16
On-line CPU(s) list: 0-15
Vendor ID: AuthenticAMD
Model name: AMD Ryzen 7 5800X3D 8-Core Processor
CPU family: 25
Model: 33
Thread(s) per core: 2
Core(s) per socket: 8
Socket(s): 1
Stepping: 2
Frequency boost: enabled
CPU max MHz: 4548.8281
CPU min MHz: 2200.0000
BogoMIPS: 6800.77
Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl nonstop_tsc cpuid extd_apicid aperfmperf rapl pni pclmulqdq monitor ssse3 fma cx16 sse4_1 sse4_2 x2apic movbe popcnt aes xsave avx f16c rdrand lahf_lm cmp_legacy svm extapic cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw ibs skinit wdt tce topoext perfctr_core perfctr_nb bpext perfctr_llc mwaitx cpb cat_l3 cdp_l3 hw_pstate ssbd mba ibrs ibpb stibp vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid cqm rdt_a rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local clzero irperf xsaveerptr rdpru wbnoinvd arat npt lbrv svm_lock nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold avic v_vmsave_vmload vgif v_spec_ctrl umip pku ospke vaes vpclmulqdq rdpid overflow_recov succor smca fsrm
Virtualization: AMD-V
L1d cache: 256 KiB (8 instances)
L1i cache: 256 KiB (8 instances)
L2 cache: 4 MiB (8 instances)
L3 cache: 96 MiB (1 instance)
NUMA node(s): 1
NUMA node0 CPU(s): 0-15
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit: Not affected
Vulnerability L1tf: Not affected
Vulnerability Mds: Not affected
Vulnerability Meltdown: Not affected
Vulnerability Mmio stale data: Not affected
Vulnerability Retbleed: Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl
Vulnerability Spectre v1: Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2: Mitigation; Retpolines, IBPB conditional, IBRS_FW, STIBP always-on, RSB filling, PBRSB-eIBRS Not affected
Vulnerability Srbds: Not affected
Vulnerability Tsx async abort: Not affected

Versions of relevant libraries:
[pip3] numpy==1.24.1
[pip3] pytorch-triton-rocm==3.0.0+dafe145982
[pip3] torch==2.3.0.dev20240204+rocm5.7
[pip3] torchaudio==2.2.0.dev20240204+rocm5.7
[pip3] torchvision==0.18.0.dev20240204+rocm5.7
[conda] Could not collect


Python packages: (only transformers is relevant besides the torch packages)

accelerate==0.28.0
aiohttp==3.9.3
aiosignal==1.3.1
annotated-types==0.6.0
asttokens==2.4.1
async-timeout==4.0.3
attrs==23.2.0
build==1.2.1
certifi==2022.12.7
charset-normalizer==2.1.1
comm==0.2.1
contourpy==1.2.0
cycler==0.12.1
datasets==2.16.1
debugpy==1.8.1
decorator==5.1.1
deepspeed==0.14.0
diffusers==0.27.2
dill==0.3.7
exceptiongroup==1.2.0
executing==2.0.1
filelock==3.9.0
fonttools==4.48.1
frozenlist==1.4.1
fsspec==2023.10.0
hjson==3.1.0
huggingface-hub==0.20.3
idna==3.4
importlib_metadata==7.1.0
ipykernel==6.29.2
ipython==8.21.0
jedi==0.19.1
Jinja2==3.1.2
joblib==1.3.2
jupyter_client==8.6.0
jupyter_core==5.7.1
kiwisolver==1.4.5
MarkupSafe==2.1.3
matplotlib==3.8.2
matplotlib-inline==0.1.6
mpmath==1.2.1
multidict==6.0.5
multiprocess==0.70.15
nest-asyncio==1.6.0
networkx==3.0rc1
ninja==1.11.1.1
numpy==1.24.1
packaging==23.2
pandas==2.2.0
parso==0.8.3
peft==0.8.2
pexpect==4.9.0
Pillow==9.3.0
platformdirs==4.2.0
prompt-toolkit==3.0.43
psutil==5.9.8
ptyprocess==0.7.0
pure-eval==0.2.2
py-cpuinfo==9.0.0
pyarrow==15.0.0
pyarrow-hotfix==0.6
pydantic==2.6.4
pydantic_core==2.16.3
Pygments==2.17.2
pynvml==11.5.0
pyparsing==3.1.1
pyproject_hooks==1.0.0
python-dateutil==2.8.2
pytorch-triton-rocm==3.0.0+dafe145982
pytz==2024.1
PyYAML==6.0.1
pyzmq==25.1.2
regex==2023.12.25
requests==2.28.1
safetensors==0.4.2
scikit-learn==1.4.0
scipy==1.12.0
six==1.16.0
stack-data==0.6.3
sympy==1.11.1
threadpoolctl==3.2.0
tokenizers==0.15.1
tomli==2.0.1
torch==2.3.0.dev20240204+rocm5.7
torchaudio==2.2.0.dev20240204+rocm5.7
torchvision==0.18.0.dev20240204+rocm5.7
tornado==6.4
tqdm==4.66.1
traitlets==5.14.1
transformers==4.37.2
typing_extensions==4.8.0
tzdata==2023.4
UNKNOWN==0.0.0
urllib3==1.26.13
wcwidth==0.2.13
xxhash==3.4.1
yarl==1.9.4
zipp==3.18.1

@Epliz
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Epliz commented May 3, 2024

also reported at ROCm/pytorch#1407

@ppanchad-amd
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Hi @Epliz, internal ticket has been created to investigate your issue. Thanks!

@schung-amd
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schung-amd commented Sep 20, 2024

Hi @Epliz, are you still experiencing this issue? If so, can you check if IOMMU is enabled in your BIOS? If it is, then make sure you have iommu=pt set in your kernel boot options (see: https://rocm.docs.amd.com/projects/install-on-linux/en/latest/reference/install-faq.html#multi-gpu). If not, then enabling IOMMU along with iommu=pt might help with performance. Also, is your ROCm 6.0 or 5.7? You have ROCm 6.0 listed but your pytorch is for ROCm 5.7. Regardless, you should also see if this slowdown is present in ROCm 6.2 (with the ROCm 6.2 build for torch, torchaudio, and torchvision).

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