Arioc v1.23

Arioc v1.23 adds support for 32-bit seed-and-extend lookup table hashing.

AriocSetup.msi: Windows binaries and examples
Arioc.w.123.zip: Windows source code only
Arioc.x.123.zip: Linux source code
Arioc.RQA.123.zip: Linux examples

Arioc v1.22

Arioc v1.22 adds support for 64-bit PowerPC architecture.

(Thanks to Dr. Ruzhu Chen [IBM] and Dr. Edward S. Chen [Baylor College of Medicine] for letting us test Arioc on a Power8 system with four Nvidia P100 GPUs.)

Arioc v1.21

Arioc v1.21 installation archives and source code

Arioc.RQA.121.zip: Linux examples
Arioc.w.121.zip: Windows source code only
Arioc.x.121.zip: Linux source code
AriocSetup.msi: Windows binaries and examples

Arioc v1.21 includes support for BS-seq alignments. This release also adds sample configurations for alignments with the human reference genome.

Arioc v1.20

Arioc v1.20 installation archives and source code:

AriocSetup.msi: Windows binaries and examples
Arioc.w.120.zip: Windows source code only
Arioc.x.120.zip: Linux source code
Arioc.RQA.120.zip: Linux examples

Arioc v1.10

Arioc v1.10 installation archives and source code:

AriocSetup.msi: Windows binaries and examples
Arioc.w.110.zip: Windows source code only
Arioc.x.110.zip: Linux source code
Arioc.RQA.110.zip: Linux examples

Arioc v1.04

Arioc v1.04 executable binaries, examples, and source code:

AriocSetup.msi: Windows binaries and examples
Arioc.Linux.zip: Linux binaries and examples
Arioc.104.zip: source code

Arioc v1.02

Removed experimental seed-coverage code from AriocP implementation.

Arioc v1.01

Arioc v1.01 executable binaries and examples:

AriocSetup.msi: Windows
Arioc.Linux.zip: Linux