About the perturbation

[SZ-qing]

Hello, I saw in your article that samples that have received drug treatment will be eliminated when perturbing. What I want to ask is if I use the move tool to disturb, do I need to take the sample that received a certain drug by myself? Remove it, or the current code will automatically remove it for me.
Thanks.

[ri-heme]

Hi there. Those samples will be removed automatically. So if your dataset has 400 samples (205 control, 195 under treatment) and you make the perturbation "control ➡️ treatment," then the 195 treatment samples will be "removed" during the associations step.

[SZ-qing]

Thanks

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---- Replied Message ---- | From | Ricardo Hernández ***@***.***> | | Date | 07/14/2023 19:16 | | To | RasmussenLab/MOVE ***@***.***> | | Cc | SZ-qing ***@***.***>, Author ***@***.***> | | Subject | Re: [RasmussenLab/MOVE] About the perturbation (Issue #86) | Hi there. Those samples will be removed automatically. So if your dataset has 400 samples (205 control, 195 under treatment) and you make the perturbation "control ➡️ treatment," then the 195 treatment samples will be "removed" during the associations step. — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: ***@***.***>