KinBot (#600)

Somehow, KinBot returned!

- Download KinBot v 2.0.6 from KinBot GitHub Releases Page
- Extracts the tar.gz file
- Installs KinBot into arc_env

arc/job/adapters/ts/kinbot_test.py

@@ -32,7 +32,7 @@ def setUpClass(cls):
         cls.maxDiff = None
         cls.rmgdb = make_rmg_database_object()
         load_families_only(cls.rmgdb)
-    @pytest.mark.skip(reason="KinBot has been deprecated")
+    #@pytest.mark.skip(reason="KinBot has been deprecated")
     def test_intra_h_migration(self):
         """Test KinBot for intra H migration reactions"""
         if HAS_KINBOT:

devtools/install_kinbot.sh

@@ -8,11 +8,9 @@ cd ..
 
 # clone the repo in the parent directory and update it
 echo "Cloning/Updating KinBot..."
-git clone https://github.com/zadorlab/KinBot
-cd KinBot || exit
-git fetch origin
-git checkout -b stable c9a915c9521a85fe989d328d825803661182e0d9 # This is the last stable installation.
-# git pull origin master # commented to avoid pulling the latest version, since it is not stable.
+wget https://github.com/zadorlab/KinBot/archive/refs/tags/v2.0.6.tar.gz
+tar -xvf "v2.0.6.tar.gz"
+cd KinBot-2.0.6 || exit
 conda activate arc_env
 python setup.py build
 python setup.py install