Read-Lab-Confederation
Popular repositories
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nyc-subway-anthrax-study
nyc-subway-anthrax-study PublicSearching for anthrax in the New York City subway metagenome.
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papista-genome-sequencing
papista-genome-sequencing PublicWhole genome sequencing of Pandoraea apista using Oxford Nanopore MinION
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MRSA_bloodstream_clusters
MRSA_bloodstream_clusters Public2018-2019 Genomic Clusters of bacteremia associated with MRSA
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Repositories
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- emergent-metagenome-pipeline Public
A pipeline written in nextflow for processing metagenomes and identifying sequences within metagenomes
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- Ct_MAP_analysis Public
- panplots Public Forked from SioStef/panplots
A small R script for generating pangenome accumulation curves
- hAMRoaster Public Forked from ewissel/hAMRoaster
hAMRoaster is an analysis pipeline that can compare the output of nine different tools for detecting AMR genes and provide metrics of their performance
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- Saureus_short_seq_database Public
Creating fasta file for the database of short DNA sequences from S. aureus publications https://docs.google.com/spreadsheets/d/1-8TOA2eY1j5h5frcOCiKiCoTMN0JCwU3sVijJ-GvHSc/edit?usp=sharing
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