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mgktools

Python Package using marginalized graph kernel (MGK) to predict molecular properties.

Installation

Suggested Package Versions:

Python(3.10)

GCC(11.2)

CUDA(11.7).

conda install rdkit -c conda-forge
pip install git+https://github.com/bp-kelley/descriptastorus
pip install git+https://gitlab.com/Xiangyan93/graphdot.git@feature/xy
pip install mgktools

Usage

See notebooks

Hyperparameters

hyperparameters contains the JSON files that define the hyperparameters for MGK.

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Package for marginalized graph kernel.

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  • Jupyter Notebook 57.3%
  • Python 42.7%