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Update rewrite_seed_with_rf.pl
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move order of required files to avoid "your TBLOUT is younger than SCORES" error
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emmaco committed Jun 2, 2023
1 parent 7236282 commit 0620890
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion Rfam/Scripts/jiffies/rewrite_seed_with_rf.pl
Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,7 @@
#my @reqdFiles_t3 = ("DESC", "outlist", "outlist.pdf", "REVTBLOUT", "SCORES", "species",
# "species.pdf", "taxinfo", "TBLOUT");
#my @nonreqdFiles = ("revoutlist", "revspecies"); # these will only exist if there were >0 reverse hits
my @reqdFiles_t3 = ("DESC", "SCORES", "SEEDSCORES", "TBLOUT", "REVTBLOUT", "SEEDTBLOUT");
my @reqdFiles_t3 = ("DESC", "TBLOUT", "SCORES", "SEEDSCORES", "REVTBLOUT", "SEEDTBLOUT");
my @nonreqdFiles = ("outlist", "outlist.pdf", "species", "species.pdf", "taxinfo", "revoutlist", "revspecies"); # these will only exist if rfsearch.pl/rfmake.pl has been run

foreach my $file (@reqdFiles_t1, @reqdFiles_t2, @reqdFiles_t3) {
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