Generate bedgraph files from Oly Rna-seq libraries

[sr320]

To better annotate genome, please create bedgraphs of RNA-seq libraries found
https://github.com/RobertsLab/project-olympia.oyster-genomic/wiki/RNA-Seq-February-2018

likely trinity or bowtie to create bam --> bedtools/genomcov

[kubu4]

http://owl.fish.washington.edu/Athaliana/20180926_oly_RNAseq_bedgraphs/20180926_oly_RNAseq.bedgraph

Notebook entry coming soon...

[kubu4]

Here's a different version, using Olurida_v080 genome assembly (data may not be fully transferred from Mox as of this posting - should finish around 01:30 tomorrow):

http://owl.fish.washington.edu/Athaliana/20180926_oly_RNAseq_genome_hisat2_bedgraph/20180926_oly_RNAseq.bedgraph