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snap2rc.default
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snap2rc.default
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[snap2]
# snapfun_utildir=path - path to package utilities, default: __pkgdatadir__
snap2dir=__pkgdatadir__
#use snap cache [0|1], default: 0
use_snap_cache=0
#snap cache fetch executable
snapc_fetch=__bindir__/snapc_fetch
#snap cache store executable
snapc_store=__bindir__/snapc_store
#snap cache root - overrides snap-cache-mgr configuration
snap_cache_root=
# blastpgp_processors
blastpgp_processors=1
#use predictprotein cache, default: 0
use_pp_cache=0
#predictprotein executable
pp_exe=__bindir__/predictprotein
#sift executable
sift_exe=__bindir__/sift_for_submitting_fasta_seq.csh
#reprof executable
reprof_exe=__bindir__/reprof
#blast executable
blast_exe=__bindir__/blastpgp
[data]
# swiss_dat=path - location of UniProt/Swiss-Prot dat file
swiss_dat=
# db_swiss=path - path to ID index of Swiss-Prot dat file (generated by __PREFIX__/share/librg-utils-perl/dbSwiss.pl)
db_swiss=
# PHAT substitution matrix
phat_matrix=__pkgdatadir__/phat.txt
[blast]
# big80=path - path to redundancy reduced database (UniProtKB 80 or equivalent)
big80=
# swiss=path - path to SwissProt database
swiss=