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6‐How‐to‐use‐results

Ruolin He edited this page Mar 12, 2024 · 2 revisions
  1. The simplest function is to standardize NRPS sequence by motif and Visiualize NRPS.

  2. User can predict C domain subtype, especially in fungi, such as in the paper:

Dong, Wang, et al. "Identification and Characterization of Peptaibols as the Causing Agents of Pseudodiploöspora longispora Infecting the Edible Mushroom Morchella." Journal of Agricultural and Food Chemistry 71.47 (2023): 18385-18394.

  1. User can guide re-engineering NRPS by results, such as in the paper:

Fan, Jie, et al. "Biosynthetic diversification of peptaibol mediates fungus-mycohost interactions." bioRxiv (2022): 2022-06.

  1. User also can use loop information and specificity-conferring codes in the A domain to aid A domain substrate prediction.
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