Dynamic simulation of models of Metabolism and macromolecular Expression
python setup.py install
notebooks/publication/start_here.ipynbto run your first dynamicME simulation.
- Python version >= 2.7.
- Note: Python 3 compatibility: scheduled Q4 2018.
- COBRApy versions <= 0.5.11. We recommend using 0.5.11
Note on version compatibility
We are working on bringing DynamicME up to date with the latest COBRApy. Please note that DynamicME is built on COBRAme, and work is underway to first make COBRAme compatible with the latest backend updates that were made in COBRApy after 0.5.11.
If you find the module useful, please consider citing: