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Cleaver2 Command Line Interface and Graphical User Interface
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@brigb123 brigb123 released this 02 Jul 18:01
· 320 commits to master since this release
v2.1
28beafe

This is the latest stable release of Cleaver2.

OSX
Double Click the mountable DMG Cleaver_2.*_osx.dmg
Read the LICENSE.txt and be sure you comply with the license agreement.
Drag Cleaver2 to the Applications shortcut.
Double Click Cleaver2 in Applications or run from the command line: /Applications/Cleaver2.app/Contents/MasOS/cleaver-gui.
You may have to Accept that you are running a program downloaded from the internet.
If the program still doesn't load, open "Settings-->Security" and push "Open Anyway" for Cleaver2.

  • For Segmentation Tools:
    • Download SCIRun_4.7.2_osx_binaries.tar.gz included in this Release.
    • Extract to a location without spaces.
    • Python should be included in your OSX distribution.

Windows
Double Click the setup file Cleaver_2.*_win32.exe
You may have to accept that you are opening an unsigned program, such as:
"More Options-->Run Anyway".
Follow the step by step install instructions.
Cleaver2 Should run after installation.

Linux
Extract the Linux tarball tar -xf Cleaver_2.*_Linux.tar.gz
Read the LICENSE.txt and be sure you comply with the license agreement.
Double Click Cleaver2 or run from the command line: ./cleaver-gui.

  • For Segmentation Tools:
  • NOTE : This binary was built on 64 bit OpenSuse 13.1. You may have to build your own binary if this one doesn't work for you.

NOTES
Load your image files or test files given in examples.zip.
Run Sizing Field, Generate Mesh, and set visual options as desired.
In order for segmentation tools to work, you must have the following:

  • SCIRun4 Installed on your machine. You will need to set the location of SCIRun4 once during GUI Runtime for segmentation tools to function. The command line tool needs the location set explicitly every run.
  • Python2.7+ Installed on your machine. You will need to set the location of Python once during GUI Runtime for segmentation tools to function. The command line tool needs the location set explicitly every run.
  • Cleaver2 MUST be installed in a location with NO SPACES in the path. (Including the Python and SCIRun4 paths) Due to cross-platform differences and system calls to python and other executables, spaces in the path cause problems. This is expected to be taken care of in the future.
  • If you set the wrong paths for SCIRun4 or Python, you can edit the .path file in your Cleaver2 path (or OSX Cleaver2.app/Contents/MacOS/).
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