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v2.1: support for visualising subsets of cells

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@jfouyang jfouyang released this 06 Jul 09:25
· 8 commits to master since this release
v2.1
71111ad

Minor update to v2.1 to support the visualization of subsets of cells

Updates include:

  • Ability to visualize subsets of cells
    --- Users can now subset cells by any categorical metadata e.g. visualize only certain libraries or clusters
    --- For dimension reduction plots, cells that are not selected will still be displayed as very light grey in the background
    --- For violin/boxplots & proportion plots & bubbleplot/heatmaps, users can also subset cells
    --- Added "Select all" and "Deselect all" buttons for user convenience
    --- Users can also choose to disable this function by specifying this new argumentenableSubset = FALSE in the makeShinyApp or makeShinyCodesMulti function (related to issue #15)
    Toggle to subset cells interface

  • Bugfix and updates to improve user experience
    --- Fix bug where short gene names cannot be searched (related to issue #19)
    --- Add an argument defPtSiz = 1.25 in the makeShinyApp and makeShinyCodesMulti function to specify default point sizes (related to issue #18)
    --- Updates to support the latest version of SCE (related to #11 #12 #17)

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