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added GenBank-specific fields to the SI configuration
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They are gb_lat_lon, gb_country, and gb_collection_date. They are all
formed from the combination of other pre-existing fields.
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MikeTrizna committed Feb 18, 2016
1 parent d5c583f commit ef303dc
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions Config/si_config.xml
Original file line number Diff line number Diff line change
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<attribute column="tissuePosition" uri="urn:tissuePosition"><![CDATA[This is the position of the tissue storage vial within the tissue rack when it enters the lab for processing.]]></attribute>
<attribute column="tissueType" uri="urn:tissueType" defined_by="http://rs.tdwg.org/dwc/terms/preparations"><![CDATA[The type of tissue that the DNA was extracted from.]]></attribute>
<attribute column="preservative" uri="urn:preservative" defined_by="http://rs.tdwg.org/dwc/terms/preparations"><![CDATA[List exactly what the tissue is preserved in in the tissue storage vial.]]></attribute>
<attribute column="gb_latlon" uri="urn:gbLatLon" defined_by="http://rs.tdwg.org/dwc/terms/verbatimCoordinates"><![CDATA[The GenBank-formatted concatenation of latitude and longitude fields.]]></attribute>
<attribute column="gb_locality" uri="urn:gbLocality" defined_by="http://rs.tdwg.org/dwc/terms/verbatimLocality"><![CDATA[The concatenation of locality and countryOrOcean fields for GenBank submission.]]></attribute>
<attribute column="gb_lat_lon" uri="urn:gbLatLon" defined_by="http://rs.tdwg.org/dwc/terms/verbatimCoordinates"><![CDATA[The GenBank-formatted concatenation of latitude and longitude fields.]]></attribute>
<attribute column="gb_country" uri="urn:gbCountry" defined_by="http://rs.tdwg.org/dwc/terms/verbatimLocality"><![CDATA[The concatenation of locality and countryOrOcean fields for GenBank submission.]]></attribute>
<attribute column="gb_collection_date" uri="urn:gbCollectionDate" defined_by="http://rs.tdwg.org/dwc/terms/verbatimEventDate"><![CDATA[Putting together the various collection data fields (or lack of them) into the format that GenBank requires.]]></attribute>
</entity>
</mapping>
<validation>
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