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removed debug leftover
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surchs committed Apr 28, 2020
1 parent 72e403d commit 55dac55
Showing 1 changed file with 3 additions and 4 deletions.
7 changes: 3 additions & 4 deletions dashQC_fmri/fmriprep_report2.py
Expand Up @@ -585,15 +585,14 @@ def generate_dashboard(prep_p, report_p, clobber=True):

if __name__ == "__main__":
parser = argparse.ArgumentParser()
generate_dashboard(pal.Path('/home/surchs/Project_Data/dash_example'),
pal.Path('temp_report'))
parser.add_argument("preproc_dir", type=str,
help="bids conform directory of the fmriprep outputs")
parser.add_argument("output_path", type=str,
help="Select the path where outputs should be generated. "
help="Select the path where report should be generated. "
"Depending on the mode, this should be either a directory name or a path to a text file.")
parser.add_argument("-c", "--clobber", type=bool, default=False,
help="If set to 'True', existing outputs will be overwritten. Default is 'False'.")
args = parser.parse_args()
generate_dashboard(pal.Path(args.preproc_dir),
pal.Path(args.output_path))
pal.Path(args.output_path),
args.clobber)

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