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SR annotion support #929

Merged
merged 28 commits into from
Mar 3, 2022
Merged

SR annotion support #929

merged 28 commits into from
Mar 3, 2022

Commits on Sep 29, 2021

  1. Add test in docs

    @howff
    howff committed Sep 29, 2021
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  2. Extract metadata alongside text from DICOM

    @howff
    howff committed Sep 29, 2021
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  3. Update README

    @howff
    howff committed Sep 29, 2021
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Commits on Sep 30, 2021

  1. Update README

    @howff
    howff committed Sep 30, 2021
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Commits on Oct 7, 2021

  1. Updated README

    abrooks2 committed Oct 7, 2021
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  2. Updated README

    abrooks2 committed Oct 7, 2021
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  3. Simplify code by using semehr_anon.py

    abrooks2 committed Oct 7, 2021
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  4. Write new DICOM whichever tag was replaced

    abrooks2 committed Oct 7, 2021
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  5. Don't reset replacedAny each time

    abrooks2 committed Oct 7, 2021
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  6. Handle ConceptNameCodeSequence which has VR but no Value

    abrooks2 committed Oct 7, 2021
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Commits on Oct 14, 2021

  1. Added new files

    abrooks committed Oct 14, 2021
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  2. Added mysql-connector-python to requirements

    abrooks committed Oct 14, 2021
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Commits on Oct 15, 2021

  1. Newer python imports collections differently

    abrooks committed Oct 15, 2021
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Commits on Oct 29, 2021

  1. Don't include metadata keys if no value

    abrooks2 committed Oct 29, 2021
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Commits on Nov 2, 2021

  1. rename mysql requirement

    abrooks2 committed Nov 2, 2021
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Commits on Nov 12, 2021

  1. Add support for eHOST-format XML in Knowtator

    abrooks2 committed Nov 12, 2021
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Commits on Nov 18, 2021

  1. Add options to output anonymisation or annotation style xml

    abrooks committed Nov 18, 2021
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Commits on Feb 20, 2022

  1. Merge branch 'master' into sr_annot_support

    abrooks2 committed Feb 20, 2022
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  2. Use different redaction character for numbers

    abrooks2 committed Feb 20, 2022
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  3. Updated news

    abrooks2 committed Feb 20, 2022
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Commits on Feb 21, 2022

  1. Better handling of zero-length annotations

    abrooks2 committed Feb 21, 2022
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  2. No need for useless warning to stdout

    abrooks2 committed Feb 21, 2022
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Commits on Mar 1, 2022

  1. Merge remote-tracking branch 'origin/master' into sr_annot_support

    @rkm
    rkm committed Mar 1, 2022
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Commits on Mar 2, 2022

  1. Fix regex for html tags

    abrooks committed Mar 2, 2022
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  2. Add test of html fix

    abrooks2 committed Mar 2, 2022
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  3. Be more strict about redacting only actual html tags

    abrooks2 committed Mar 2, 2022
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Commits on Mar 3, 2022

  1. Fix news

    abrooks committed Mar 3, 2022
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  2. Merge branch 'master' into sr_annot_support

    abrooks committed Mar 3, 2022
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