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* Fix deletion finding bug (seems pysam returns indel==0 is is_del=1 as the CIGAR parser "peeks" forward, rather than returning the current) * Add a symbol for deletions, this appears to enhance performance on very messy data (lots of structucal variation that we might not want to ignore, on HIV-1, for example) * Force a minimum reweight value, this might be a bad idea
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