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Bioinformatics and Data Centre
- Gothenburg
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EBV_RNASeqPipeline
EBV_RNASeqPipeline PublicContains the scripts for the EBV master pipeline that runs on mandalore
Python 1
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RNA_Seq_Pipe
RNA_Seq_Pipe PublicRNA seq pipeline where the user input fastq files, star index and a gtf for the Quantification, obs works for roy.
Nextflow 1
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Viral_Integration_Pipe
Viral_Integration_Pipe PublicViral integration pipeline, looking for integrations, annotates and bins the data. One part working written for shortread and one for longreads (nanopore)
Python
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