Update pipeline step names

SanojPunchihewa · Mar 16, 2020 · 1328598 · 1328598
1 parent 53f5fab
commit 1328598
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/app/src/main/java/com/mobilegenomics/f5n/core/PipelineStep.java b/app/src/main/java/com/mobilegenomics/f5n/core/PipelineStep.java
@@ -2,8 +2,8 @@
 
 public enum PipelineStep {
     MINIMAP2_SEQUENCE_ALIGNMENT(0, "minimap2 -x map-ont"),
-    SAMTOOL_SORT(1, "samtool sort"),
-    SAMTOOL_INDEX(2, "samtool index"),
+    SAMTOOLS_SORT(1, "samtools sort"),
+    SAMTOOLS_INDEX(2, "samtools index"),
     F5C_INDEX(3, "f5c index"),
     F5C_CALL_METHYLATION(4, "f5c call-methylation"),
     F5C_EVENT_ALIGNMENT(5, "f5c eventalign"),