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123 Open 375 Closed
123 Open 375 Closed
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Issues list

Utility to convert ImageJ ROI files to segmentation files 🎈 Enhancement Enhancement to an existing feature 🌔 New utility New utility
#526 opened Jul 2, 2024 by ElpadoCan
Allow specifying Fiji location in case already present on macOS 🎈 Enhancement Enhancement to an existing feature
#525 opened Jun 4, 2024 by ElpadoCan
Create data structure on macOS by automatic downloading Fiji.app and run macro headless 🚀 New feature New feature to code from scratch
#520 opened May 9, 2024 by ElpadoCan
New tracker tracking first groups and then objects relative to each other within groups 🚀 New feature New feature to code from scratch
#519 opened May 8, 2024 by ElpadoCan
Error in opening folder for segmentation 🐛 Bug Something isn't working
#511 opened Apr 21, 2024 by NidhiChopdekar
2
How to convert npz to COCO format 🚀 New feature New feature to code from scratch
#510 opened Apr 18, 2024 by ptlzon
1
Allow applying filters permanently gui 🎈 Enhancement Enhancement to an existing feature
#503 opened Mar 22, 2024 by ElpadoCan
Handle Spacing parameters for trackpy differently? 🎈 Enhancement Enhancement to an existing feature
#499 opened Mar 10, 2024 by Beno71
1
"Add points layer" function permanently changes mouse cursor 🐛 Bug Something isn't working
#496 opened Mar 9, 2024 by Beno71
1
unexpected keyword argument 'net_avg' error when loading cellpose model 🐛 Bug Something isn't working
#481 opened Feb 19, 2024 by ptlzon
5
CellACDC_normal_division_tracker lineage tree has funny values when saved 🐛 Bug Something isn't working
#472 opened Jan 22, 2024 by Teranis
@Teranis
Cell_ACDC_normal_division tracker lost tracked IDs are not ignored 🐛 Bug Something isn't working
#468 opened Jan 19, 2024 by ElpadoCan
@Teranis @ElpadoCan
Improve and add descriptions of variables in pomBseen and pomBseen nuclear 🎈 Enhancement Enhancement to an existing feature
#465 opened Jan 16, 2024 by Teranis
@Teranis
Timelapse tracks visualization and correction tool 🚀 New feature New feature to code from scratch
#457 opened Dec 27, 2023 by ElpadoCan
Visualize features data from the acdc_output file 🚀 New feature New feature to code from scratch
#455 opened Dec 21, 2023 by ElpadoCan
2 tasks
Add togglable option to annotate movement between consecutive frames 🎈 Enhancement Enhancement to an existing feature
#449 opened Dec 14, 2023 by ElpadoCan
When running BABY warn user that it is better to crop single traps 🎈 Enhancement Enhancement to an existing feature
#448 opened Dec 13, 2023 by ElpadoCan
Flatten BABY masks starting from largest cell down to smallest 🎈 Enhancement Enhancement to an existing feature
#447 opened Dec 13, 2023 by ElpadoCan
Add pixel_size parameter to segmentation with BABY 🎈 Enhancement Enhancement to an existing feature
#446 opened Dec 13, 2023 by ElpadoCan
Save additional information when using BABY 🎈 Enhancement Enhancement to an existing feature
#445 opened Dec 13, 2023 by ElpadoCan
When using BABY in module 3 GUI warn that only 2D model can be tested 🎈 Enhancement Enhancement to an existing feature
#444 opened Dec 13, 2023 by ElpadoCan
Annotate cell cycle with BABY 🚀 New feature New feature to code from scratch
#443 opened Dec 13, 2023 by ElpadoCan
Right-side dock widget with list of objects and checkboxes for Visible and Done 🚀 New feature New feature to code from scratch
#442 opened Dec 8, 2023 by ElpadoCan
1
Allow skipping segmentation in module 2 if segmentation file is found 🎈 Enhancement Enhancement to an existing feature
#437 opened Nov 10, 2023 by ElpadoCan
Fata error after selecting not to align images again 🐛 Bug Something isn't working
#434 opened Nov 10, 2023 by Teranis
1
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