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Updated case study
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skarunan committed Feb 15, 2019
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Expand Up @@ -90,13 +90,16 @@ A detailed description of all the command-line parameters can be found under the
Case Studies
------------

To exemplify the use of RAPID, we performed to case studies. Sample outputs from the case study can be seen following the links below.
To exemplify the use of RAPID, we performed two case studies, which are part of the bioarXiv/Manuscript. Using the Reproducible script, and associated data provided in the `GitHub page of RAPID <https://github.com/SchulzLab/RAPID/tree/master/CaseStudy/>`_ , you can perform all the analysis part of these case studies.

Below you can find few sample output from the case studies.

An example visualisation of the basic statistics produced by RAPID, for the *Paramecium tetraurelia* case study .
`Visualization of Statistics <http://htmlpreview.github.io/?https://github.com/SchulzLab/RAPID/blob/master/CaseStudy/ExampleVisualization/Visualization_BasicStatistics_rDNA_EST_51A.html>`_

An example visualisation of the normalised comparison plots produced by RAPID, for the *Paramecium tetraurelia* case study .
`Visualization of Comparisons <http://htmlpreview.github.io/?https://github.com/SchulzLab/RAPID/blob/master/CaseStudy/ExampleVisualization/Visualization_Comparison_All_rDNA.html>`_

Using the Reproducible script, and associated data provided in the `GitHub page of RAPID <https://github.com/SchulzLab/RAPID/tree/master/CaseStudy/>`_ , you can perform all the analysis part of these case studies.


Visualization: Statistical Report
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