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reread relevant outputs
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ShanKothari committed Dec 27, 2023
1 parent e8e8bc0 commit f33613b
Showing 1 changed file with 6 additions and 4 deletions.
10 changes: 6 additions & 4 deletions 03G plsr_models_EWT_correction.R
Original file line number Diff line number Diff line change
Expand Up @@ -364,6 +364,11 @@ write.coefs(obj=EWT_jack_coefs_ground,
###############################################
## plotting internal validation output

EWT_jack_df_fresh<-readRDS("SavedResults/EWT_corrected_jack_df_fresh.rds")
EWT_jack_df_pressed<-readRDS("SavedResults/EWT_corrected_jack_df_pressed.rds")
EWT_jack_df_pressed1300<-readRDS("SavedResults/EWT_corrected_jack_df_pressed1300.rds")
EWT_jack_df_ground<-readRDS("SavedResults/EWT_corrected_jack_df_ground.rds")

focal_palette=palette(brewer.pal(8,name="Set2")[c(3,4,5,6,8,1,2)])

all.EWT<-c(EWT_jack_df_pressed$Measured,
Expand Down Expand Up @@ -519,7 +524,4 @@ with(EWT_ext_pressed1300_pred_df,
min=0.025,max=0.975))
with(EWT_ext_pressed1300_pred_df[-which(EWT_ext_pressed1300_pred_df$FunctionalGroup=="conifer"),],
percentRMSD(measured = Measured,predicted = pred_mean,
min=0.025,max=0.975))

## to dos:
## output the data for upload to EcoSIS
min=0.025,max=0.975))

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