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富集分析 #94

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ShixiangWang opened this issue Dec 25, 2019 · 9 comments

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ShixiangWang commented Dec 25, 2019

能否基于组别比较的结果做出富集分析

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ShixiangWang commented Dec 26, 2019

可以尝试极坐标的 bubble plot，类似xi下面这种。目前还不清楚怎么实现。

ShixiangWang added the enhancement label

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ShixiangWang commented Mar 14, 2020

https://github.com/spren9er/tidytuesday/blob/master/tidytuesday_201946_cran_packages.r

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ShixiangWang commented Jun 3, 2020

参考 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4936490/#!po=0.625000

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ShixiangWang commented Jun 11, 2020

环状图实现新方式 https://mp.weixin.qq.com/s/Il8yZqUoBVCvND7U7HKxxA 观测观测

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ShixiangWang commented Jun 11, 2020

https://github.com/YuLab-SMU/ggtreeExtra

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ShixiangWang commented Jul 7, 2020

接下来以热图形式或条形图形式实现

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Signature enrichment analysis #277

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ShixiangWang commented Oct 16, 2020

热图式的可视化方式已经实现 0aa1d2f

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ShixiangWang commented Oct 16, 2020

复杂一点的网络图需要学习一些新的工具，像 ggraph，目前没有经验以后再说把。

ShixiangWang closed this as completed

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ShixiangWang commented Oct 27, 2020

https://github.com/hannet91/ggcor#network 这个有空可以参考下。

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