########################################################################################################################################################################################## ##This folder contains scripts used in a paper "Androgen receptor binding sites enabling genetic prediction of mortality due to prostate cancer in cancer-free subjects" by Ito et al.
A.contents of the folder (list of scripts) 1.PrCa_GWAS_QC.md 2.PrCa_GWAS_SAIGE.md 3.PrCa_GWAS_MANTRA.md 4.PrCa_GREGOR.md 5.PrCa_PRS.md 6.PrCa_PRS.R
B.description of the scirpts 1.how we conducted quality control for GWAS 2.how we conducted GWAS using SAIGE 3.how we conducted a trans-ancestry meta-analysis using MANTRA 4.how we conducted enrichment analyses using GREGOR 5.how we constructed PRS 6.R codes for 5.
C.contact If you have a question, pleast contact to Chikashi Terao, chikashi.terao@riken.jp