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  1. PIRATE PIRATE Public

    A toolbox for pangenome analysis and threshold evaluation.

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  2. Bio-Courses Bio-Courses Public

    Tutorials for bacterial WGS

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  3. MHO_analysis MHO_analysis Public

    MHO_001 hybrid read assembly and analysis

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  4. HierarchicalML HierarchicalML Public

    Hierarchical ML Package with example application for Salmonella Enteritidis

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  5. conda-recipes conda-recipes Public

    conda recipes

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  6. treeWAS-helper treeWAS-helper Public

    Scripts to facilitate running treeWAS and improve visualisation of outputs

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